Inverted repeats in coronavirus SARS-CoV-2 genome manifest the evolution events
Sign Up to like & getrecommendations! Published in 2021 at "Journal of Theoretical Biology"
DOI: 10.1016/j.jtbi.2021.110885
Abstract: The world faces a great unforeseen challenge through the COVID-19 pandemic caused by coronavirus SARS-CoV-2. The virus genome structure and evolution are positioned front and center for further understanding insights on vaccine development, monitoring of… read more here.
Keywords: coronavirus sars; inverted repeats; evolution events; cov genome ... See more keywords
Widely spaced and divergent inverted repeats become a potent source of chromosomal rearrangements in long single-stranded DNA regions
Sign Up to like & getrecommendations! Published in 2023 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkad153
Abstract: Abstract DNA inverted repeats (IRs) are widespread across many eukaryotic genomes. Their ability to form stable hairpin/cruciform secondary structures is causative in triggering chromosome instability leading to several human diseases. Distance and sequence divergence between… read more here.
Keywords: single stranded; dna; chromosomal rearrangements; inverted repeats ... See more keywords
Coding palindromes in mitochondrial genes of Nematomorpha
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DOI: 10.1093/nar/gkz517
Abstract: Abstract Inverted repeats are common DNA elements, but they rarely overlap with protein-coding sequences due to the ensuing conflict with the structure and function of the encoded protein. We discovered numerous perfect inverted repeats of… read more here.
Keywords: mitochondrial genes; palindromes mitochondrial; coding palindromes; inverted repeats ... See more keywords
Interaction of Proteins with Inverted Repeats and Cruciform Structures in Nucleic Acids
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DOI: 10.3390/ijms23116171
Abstract: Cruciforms occur when inverted repeat sequences in double-stranded DNA adopt intra-strand hairpins on opposing strands. Biophysical and molecular studies of these structures confirm their characterization as four-way junctions and have demonstrated that several factors influence… read more here.
Keywords: inverted repeat; dna; inverted repeats; repeat sequences ... See more keywords
Chloroplast Genome Annotation Tools: Prolegomena to the Identification of Inverted Repeats
Sign Up to like & getrecommendations! Published in 2022 at "International Journal of Molecular Sciences"
DOI: 10.3390/ijms231810804
Abstract: The development of next-generation sequencing technology and the increasing amount of sequencing data have brought the bioinformatic tools used in genome assembly into focus. The final step of the process is genome annotation, which works… read more here.
Keywords: annotation tools; inverted repeats; chloroplast sequences; annotation ... See more keywords