BAL31-NGS approach for identification of telomeres de novo in large genomes.
Sign Up to like & getrecommendations! Published in 2017 at "Methods"
DOI: 10.1016/j.ymeth.2016.08.017
Abstract: This article describes a novel method to identify as yet undiscovered telomere sequences, which combines next generation sequencing (NGS) with BAL31 digestion of high molecular weight DNA. The method was applied to two groups of… read more here.
Keywords: large genomes; approach identification; ngs approach; bal31 ngs ... See more keywords
Intense proliferation of rDNA sites and heterochromatic bands in two distantly related Cuscuta species (Convolvulaceae) with very large genomes and symmetric karyotypes
Sign Up to like & getrecommendations! Published in 2020 at "Genetics and Molecular Biology"
DOI: 10.1590/1678-4685-gmb-2019-0068
Abstract: Abstract The genome size varies widely among angiosperms but only a few clades present huge variation at a low phylogenetic level. Among diploid species of the genus Cuscuta the genome size increased enormously in at… read more here.
Keywords: heterochromatic bands; sites heterochromatic; rdna sites; intense proliferation ... See more keywords
D-GENIES: dot plot large genomes in an interactive, efficient and simple way
Sign Up to like & getrecommendations! Published in 2018 at "PeerJ"
DOI: 10.7717/peerj.4958
Abstract: Dot plots are widely used to quickly compare sequence sets. They provide a synthetic similarity overview, highlighting repetitions, breaks and inversions. Different tools have been developed to easily generated genomic alignment dot plots, but they… read more here.
Keywords: large genomes; plot; plot large; genies dot ... See more keywords