Rapid species-level metagenome profiling and containment estimation with sylph
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DOI: 10.1038/s41587-024-02412-y
Abstract: Profiling metagenomes against databases allows for the detection and quantification of microorganisms, even at low abundances where assembly is not possible. We introduce sylph, a species-level metagenome profiler that estimates genome-to-metagenome containment average nucleotide identity… read more here.
Keywords: level metagenome; ani; species level; sylph ... See more keywords