Articles with "ligand interaction" as a keyword



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Dynamic Metal–Ligand Interaction of Synergistic Polymers for Bistable See‐Through Electrochromic Devices

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Published in 2021 at "Advanced Materials"

DOI: 10.1002/adma.202104413

Abstract: Bistable electrochromic materials are a promising alternative solution to reduce energy consumption in displays. Limited by the mechanism and lack of a design strategy, only a few electrochromic materials have truly been able achieve bistability.… read more here.

Keywords: dynamic metal; electrochromic materials; interaction synergistic; ligand ... See more keywords
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Efficient computation of co-transcriptional RNA-ligand interaction dynamics.

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Published in 2018 at "Methods"

DOI: 10.1016/j.ymeth.2018.04.036

Abstract: Riboswitches form an abundant class of cis-regulatory RNA elements that mediate gene expression by binding a small metabolite. For synthetic biology applications, they are becoming cheap and accessible systems for selectively triggering transcription or translation… read more here.

Keywords: ligand interaction; rna ligand; interaction dynamics; transcriptional rna ... See more keywords
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Forging the Basis for Developing Protein-Ligand Interaction Scoring Functions.

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Published in 2017 at "Accounts of chemical research"

DOI: 10.1021/acs.accounts.6b00491

Abstract: In structure-based drug design, scoring functions are widely used for fast evaluation of protein-ligand interactions. They are often applied in combination with molecular docking and de novo design methods. Since the early 1990s, a whole… read more here.

Keywords: scoring function; scoring functions; protein ligand; ligand interaction ... See more keywords
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MGPLI: exploring multigranular representations for protein-ligand interaction prediction

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Published in 2022 at "Bioinformatics"

DOI: 10.1093/bioinformatics/btac597

Abstract: MOTIVATION The capability to predict the potential drug binding affinity against a protein target has always been a fundamental challenge in-silico drug discovery. The traditional experiments in vitro and in vivo are costly and time-consuming… read more here.

Keywords: interaction; prediction; level features; ligand interaction ... See more keywords
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Improving Protein–Ligand Interaction Modeling with cryo-EM Data, Templates, and Deep Learning in 2021 Ligand Model Challenge

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Published in 2022 at "Biomolecules"

DOI: 10.1101/2022.05.27.493799

Abstract: Elucidating protein-ligand interaction is crucial for studying the function of proteins and compounds in an organism and critical for drug discovery and design. The problem of protein-ligand interaction is traditionally tackled by molecular docking and… read more here.

Keywords: protein ligand; ligand interaction; deep learning; ligand ... See more keywords
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Tractable RNA–ligand interaction kinetics

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Published in 2017 at "BMC Bioinformatics"

DOI: 10.1186/s12859-017-1823-5

Abstract: BackgroundThe binding of small ligands to RNA elements can cause substantial changes in the RNA structure. This constitutes an important, fast-acting mechanism of ligand-controlled transcriptional and translational gene regulation implemented by a wide variety of… read more here.

Keywords: ligand interaction; ligand; rna ligand; analysis ... See more keywords
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Computational Analysis of Physicochemical Factors Driving CYP2D6 Ligand Interaction.

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Published in 2017 at "Current computer-aided drug design"

DOI: 10.2174/1573409912666160909092600

Abstract: BACKGROUND The metabolic action of CYP2D6 remains a crucial factor influencing the therapeutic outcomes for many drug molecules while others are either only slightly affected or not affected altogether. OBJECTIVE This study seeks to understand,… read more here.

Keywords: drug; cyp2d6; ligand interaction; physicochemical factors ... See more keywords