Construction of the First High-Density Genetic Linkage Map and Analysis of Quantitative Trait Loci for Growth-Related Traits in Sinonovacula constricta
Sign Up to like & getrecommendations! Published in 2017 at "Marine Biotechnology"
DOI: 10.1007/s10126-017-9768-2
Abstract: The razor clam (Sinonovacula constricta) is an important aquaculture species, for which a high-density genetic linkage map would play an important role in marker-assisted selection (MAS). In this study, we constructed a high-density genetic map… read more here.
Keywords: high density; map; linkage; density genetic ... See more keywords
Construction of genetic linkage map using genotyping-by-sequencing and identification of QTLs associated with leaf color in spinach
Sign Up to like & getrecommendations! Published in 2018 at "Euphytica"
DOI: 10.1007/s10681-018-2312-2
Abstract: Spinach (Spinacia oleracea L.) is widely cultivated as an important green leafy vegetable crop with great economic values. High-density genetic linkage maps are valuable resources in marker-assisted breeding and functional genomics; however, most of such… read more here.
Keywords: spinach; leaf color; linkage; linkage map ... See more keywords
Construction of a linkage map flanking the I locus controlling dominant white bulb color and analysis of differentially expressed genes between dominant white and red bulbs in onion (Allium cepa L.)
Sign Up to like & getrecommendations! Published in 2020 at "Euphytica"
DOI: 10.1007/s10681-020-02638-2
Abstract: White bulb colors of onion (Allium cepa L.) are determined by the C and I loci which control the so-called recessive and dominant white bulb colors, respectively. To identify the causal gene responsible for the… read more here.
Keywords: dominant white; flanking locus; white bulb; linkage map ... See more keywords
Construction of a SNP-based genetic linkage map for kiwifruit using next-generation restriction-site-associated DNA sequencing (RADseq)
Sign Up to like & getrecommendations! Published in 2017 at "Molecular Breeding"
DOI: 10.1007/s11032-017-0729-2
Abstract: Kiwifruit is a perennial horticultural crop species of the Actinidiaceae family and has high nutritional value. For a species with a long generation time, traditional breeding and genetic improvement is predicted to take more than… read more here.
Keywords: map; generation; kiwifruit; linkage map ... See more keywords
The first genetic linkage map for Fraxinus pennsylvanica and syntenic relationships with four related species
Sign Up to like & getrecommendations! Published in 2018 at "Plant Molecular Biology"
DOI: 10.1007/s11103-018-0815-9
Abstract: Key messageThe genetic linkage map for green ash (Fraxinus pennsylvanica) contains 1201 DNA markers in 23 linkage groups spanning 2008.87cM. The green ash map shows stronger synteny with coffee than tomato.AbstractGreen ash (Fraxinus pennsylvanica) is… read more here.
Keywords: fraxinus pennsylvanica; green ash; map; linkage map ... See more keywords
First high-resolution genetic linkage map of taimen (Hucho taimen) and its application in QTL analysis of growth-related traits
Sign Up to like & getrecommendations! Published in 2020 at "Aquaculture"
DOI: 10.1016/j.aquaculture.2020.735680
Abstract: Abstract Taimen (Hucho taimen) is an excellent aquaculture species. Currently, no selective breeding program has been conducted. To promote molecular breeding for taimen, we used genotype-by-sequencing technology to construct a high-resolution linkage map and performed… read more here.
Keywords: high resolution; linkage map; growth related; linkage ... See more keywords
A pentaploid-based linkage map of the ancestral octoploid strawberry Fragaria virginiana reveals instances of sporadic hyper-recombination.
Sign Up to like & getrecommendations! Published in 2020 at "Horticulture research"
DOI: 10.1038/s41438-020-0308-2
Abstract: The first high-resolution genetic linkage map of the ancestral octoploid (2n = 8x = 56) strawberry species, Fragaria virginiana, was constructed using segregation data obtained from a pentaploid progeny population. This novel mapping population of size 178 was generated… read more here.
Keywords: map ancestral; ancestral octoploid; map; linkage ... See more keywords
A high-density genetic linkage map and QTL mapping for growth and sex of yellow drum (Nibea albiflora)
Sign Up to like & getrecommendations! Published in 2018 at "Scientific Reports"
DOI: 10.1038/s41598-018-35583-1
Abstract: A high-density genetic linkage map is essential for the studies of comparative genomics and gene mapping, and can facilitate assembly of reference genome. Herein, we constructed a high-density genetic linkage map with 8,094 SNPs selected… read more here.
Keywords: high density; map; linkage; linkage map ... See more keywords
Construction of a high density linkage map in Oil Palm using SPET markers
Sign Up to like & getrecommendations! Published in 2020 at "Scientific Reports"
DOI: 10.1038/s41598-020-67118-y
Abstract: A high-density genetic linkage map from a controlled cross of two oil palm ( Elaeis guineensis ) genotypes was constructed based on Single Primer Enrichment Technology (SPET) markers. A 5K panel of hybridization probes were… read more here.
Keywords: spet markers; density; linkage; linkage map ... See more keywords
A high density linkage map and quantitative trait loci for tree growth for New Zealand mānuka (Leptospermum scoparium)
Sign Up to like & getrecommendations! Published in 2018 at "New Zealand Journal of Crop and Horticultural Science"
DOI: 10.1080/01140671.2018.1540437
Abstract: ABSTRACT A high-density linkage map was constructed for mānuka (Leptospermum scoparium) genotyping by sequencing (GBS) and a segregating population developed using accessions from the East Cape region of New Zealand. Parental maps were constructed using… read more here.
Keywords: new zealand; high density; density linkage; linkage map ... See more keywords
Lep-Anchor: automated construction of linkage map anchored haploid genomes
Sign Up to like & getrecommendations! Published in 2020 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btz978
Abstract: MOTIVATION Linkage mapping provides a practical way to anchor de novo genome assemblies into chromosomes and to detect chimeric or otherwise erroneous contigs. Such anchoring improves with higher numbers of markers and individuals, as long… read more here.
Keywords: accuracy; linkage map; anchor; lep anchor ... See more keywords