Articles with "loop model" as a keyword



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Heterogeneous Loop Model to Infer 3D Chromosome Structures from Hi-C.

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Published in 2019 at "Biophysical journal"

DOI: 10.1016/j.bpj.2019.06.032

Abstract: Adapting a well-established formalism in polymer physics, we develop a minimalist approach to infer three-dimensional folding of chromatin from Hi-C data. The three-dimensional chromosome structures generated from our heterogeneous loop model (HLM) are used to… read more here.

Keywords: heterogeneous loop; chromosome structures; loop model; cell ... See more keywords
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An Anisotropic Distribution Dislocation Loop Model for Simulation of Nanoindentation of Single Crystals

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Published in 2017 at "Mechanics of Materials"

DOI: 10.1016/j.mechmat.2017.02.004

Abstract: Abstract An anisotropic distribution dislocation loop model is proposed for simulation of nanoindentation of single crystals based on the recently available solution of the elastic displacement and stress fields due to a polygonal dislocation within… read more here.

Keywords: dislocation; single crystals; loop model; nanoindentation ... See more keywords
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Three-quark potentials in an SU(3) effective Polyakov loop model

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Published in 2019 at "Nuclear Physics B"

DOI: 10.1016/j.nuclphysb.2019.02.002

Abstract: Abstract Three-quark potentials are studied in great details in the three-dimensional S U ( 3 ) pure gauge theory at finite temperature, for the cases of static sources in the fundamental and adjoint representations. For… read more here.

Keywords: polyakov loop; quark potentials; three quark; quark ... See more keywords
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Filtering Intestinal Loop Model: An Experimental Approach as Renal Function Substitute

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Published in 2018 at "Transplantation"

DOI: 10.1097/01.tp.0000543699.97133.2e

Abstract: Background Chronic kidney disease is a serious health problem worldwide. Dialysis and renal transplantation, the only therapeutic alternatives for these patients, are expensive and present technical and logistic difficulties. For these reasons, new approaches to… read more here.

Keywords: intestinal loop; model; loop model; ability ... See more keywords
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Tandem Repeat-Based Probes Support the Loop Model of Pericentromere Packing

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Published in 2021 at "Cytogenetic and Genome Research"

DOI: 10.1159/000513228

Abstract: Constitutive heterochromatin is the most mysterious part of the eukaryotic genome. It forms vital chromosome regions such as the centromeric and the pericentromeric ones. The main component of heterochromatic regions are tandem repeats (TR), and… read more here.

Keywords: spermatogenic cells; tandem repeat; support loop; loop model ... See more keywords