Online Phylogenetics with matOptimize Produces Equivalent Trees and is Dramatically More Efficient for Large SARS-CoV-2 Phylogenies than de novo and Maximum-Likelihood Implementations.
Sign Up to like & getrecommendations! Published in 2023 at "Systematic biology"
DOI: 10.1093/sysbio/syad031
Abstract: Phylogenetics has been foundational to SARS-CoV-2 research and public health policy, assisting in genomic surveillance, contact tracing, and assessing emergence and spread of new variants. However, phylogenetic analyses of SARS-CoV-2 have often relied on tools… read more here.
Keywords: matoptimize produces; online phylogenetics; cov phylogenies; maximum likelihood ... See more keywords