Articles with "metadynamics protocol" as a keyword



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General Metadynamics Protocol To Simulate Activation/Deactivation of Class A GPCRs: Proof of Principle for the Serotonin Receptor.

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Published in 2023 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.3c00208

Abstract: We present a generally applicable metadynamics protocol for characterizing the activation free-energy profiles of class A G-protein coupled receptors and a proof-of-principle study for the 5HT1A-receptor. The almost universal A100 activation index, which depends on… read more here.

Keywords: proof principle; class; serotonin receptor; metadynamics protocol ... See more keywords