Metagenomic analysis of the fecal microbiome in colorectal cancer patients compared to healthy controls as a function of age
Sign Up to like & getrecommendations! Published in 2022 at "Cancer Medicine"
DOI: 10.1002/cam4.5197
Abstract: Colorectal cancer (CRC) incidence is increasing in young patients without a clear etiology. Emerging data have implicated the fecal microbiome in CRC carcinogenesis. However, its impact on young onset CRC is poorly defined. read more here.
Keywords: analysis fecal; metagenomic analysis; colorectal cancer; fecal microbiome ... See more keywords
Metagenomic Analysis of Microbial Community Affiliated with Termitarium Reveals High Lignocellulolytic Potential.
Sign Up to like & getrecommendations! Published in 2021 at "Current microbiology"
DOI: 10.1007/s00284-021-02427-7
Abstract: Termitarium (nest of termites) is a rich source of microbial populations whose resources remain untapped to date. Using the metagenomic sequencing approach, we generated 38 GB sequences comprising 808,386 contigs (896 MB) with a maximum contig size… read more here.
Keywords: microbial community; termitarium; analysis microbial; metagenomic analysis ... See more keywords
Metagenomic analysis of nepoviruses: diversity, evolution and identification of a genome region in members of subgroup A that appears to be important for host range
Sign Up to like & getrecommendations! Published in 2021 at "Archives of Virology"
DOI: 10.1007/s00705-021-05111-0
Abstract: Data mining and metagenomic analysis of 277 open reading frame sequences of bipartite RNA viruses of the genus Nepovirus, family Secoviridae, were performed, documenting how challenging it can be to unequivocally assign a virus to… read more here.
Keywords: diversity evolution; members subgroup; metagenomic analysis; host range ... See more keywords
Metagenomic Analysis of the Faecal Microbiome of Rats with 1, 2-Dimethylhydrazine Induced Colon Cancer and Prophylactic Whole-Cell Carotenoid Intervention
Sign Up to like & getrecommendations! Published in 2021 at "Indian Journal of Microbiology"
DOI: 10.1007/s12088-020-00909-z
Abstract: Rapidly evolving sequencing technologies have enabled efficient sequencing of complex genomes and metagenomes. Here, we have presented our metagenomic analysis of rat faeces isolated DNA, sequenced using long-read sequencing technology. The microbiome changes in the… read more here.
Keywords: whole cell; analysis; microbiome rats; metagenomic analysis ... See more keywords
Exploring the antibiotic resistome in activated sludge and anaerobic digestion sludge in an urban wastewater treatment plant via metagenomic analysis
Sign Up to like & getrecommendations! Published in 2019 at "Journal of Microbiology"
DOI: 10.1007/s12275-020-9309-y
Abstract: Antibiotic resistance genes (ARGs) are emerging contaminants that pose a potential threat to human health worldwide. Urban wastewater treatment plants (WWTPs) are a main source of both antibiotic-resistant bacteria and ARGs released into the environment.… read more here.
Keywords: ads samples; metagenomic analysis; wastewater treatment; sludge ... See more keywords
Metagenomic analysis using 16S ribosomal RNA genes of a bacterial community in an urban stream, the Tama River, Tokyo
Sign Up to like & getrecommendations! Published in 2018 at "Fisheries Science"
DOI: 10.1007/s12562-018-1193-6
Abstract: In an effort to determine genus- or species-level taxonomic profiles and diversity of bacterial consortia in the Tama River around urban Tokyo, next-generation sequencing technology targeting a 16S ribosomal RNA (rRNA) gene amplicon was employed.… read more here.
Keywords: 16s ribosomal; metagenomic analysis; tama river;
Metagenomic Analysis of Human Lens Microbiota Associated with Ophthalmic Diseases
Sign Up to like & getrecommendations! Published in 2017 at "BioNanoScience"
DOI: 10.1007/s12668-016-0346-2
Abstract: Keratoconus is an ophthalmological pathology which is manifested in noninflammatory conical protrusion of the central part of the cornea. Its etiology is still unknown and pathogenesis is poorly explored. There are number of reports supporting… read more here.
Keywords: analysis; analysis human; metagenomic analysis; lens microbiota ... See more keywords
16S rRNA-Based metagenomic analysis of microbial communities associated with wild Labroides dimidiatus from Karah Island, Terengganu, Malaysia
Sign Up to like & getrecommendations! Published in 2019 at "Biotechnology Reports"
DOI: 10.1016/j.btre.2019.e00303
Abstract: Highlights • Proteobacteria, Bacteroidetes, Firmicutes, Actinobacteria and Fusobacteria. dominated the bacteria of Labroides dimidiatus.• A total of 36 classes and 132 families were identified of the 1,426,740 amplicon sequence reads obtained.• The bacterial identified is… read more here.
Keywords: rrna based; metagenomic analysis; analysis microbial; labroides dimidiatus ... See more keywords
Metagenomic analysis of microbial community structure and distribution of resistance genes in Daihai Lake, China.
Sign Up to like & getrecommendations! Published in 2022 at "Environmental pollution"
DOI: 10.1016/j.envpol.2022.119065
Abstract: The emergence of resistance genes is a global phenomenon that poses a significant threat to both animals and humans. Lakes are important reservoirs of genes that confer resistant to antibiotics and metals. In this study,… read more here.
Keywords: daihai lake; resistance; metagenomic analysis; resistance genes ... See more keywords
Metagenomic analysis reveals genetic insights on biogeochemical cycling, xenobiotic degradation, and stress resistance in mudflat microbiome.
Sign Up to like & getrecommendations! Published in 2021 at "Journal of environmental management"
DOI: 10.1016/j.jenvman.2021.112738
Abstract: Mudflats are highly productive coastal ecosystems that are dominated by halophytic vegetation. In this study, the mudflat sediment microbiome was investigated from Nalabana Island, located in a brackish water coastal wetland of India; Chilika, based… read more here.
Keywords: analysis; metagenomic analysis; mudflat microbiome; stress resistance ... See more keywords
Metagenomic analysis of tarball-associated bacteria from Goa, India.
Sign Up to like & getrecommendations! Published in 2019 at "Marine pollution bulletin"
DOI: 10.1016/j.marpolbul.2019.02.040
Abstract: The beaches of Goa state in India are frequently polluted with tarballs, specifically during pre-monsoon and monsoon seasons. Tarballs contain hydrocarbons, including polycyclic aromatic hydrocarbons, which pose significant environmental risks. Microbes associated with tarballs reportedly… read more here.
Keywords: associated bacteria; tarball associated; analysis tarball; metagenomic analysis ... See more keywords