LAUSR

Microbial occurrence and antibiotic resistance in ready-to-go food items

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0 Published in 2018 at "Journal of Food Science and Technology"

DOI: 10.1007/s13197-018-3180-4

Abstract: Foodborne pathogens, such as Escherichia coli, and Salmonella, are commonly prevalent in contaminated food products seen through annual food recalls. Excessive use of antibiotics through the past few decades has led to a multitude of… read more here.

Keywords: ready food; microbial occurrence; antibiotic resistance; food ... See more keywords

Incorporating phylogenetic metrics to microbial co‐occurrence networks based on amplicon sequences to discern community assembly processes

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0 Published in 2019 at "Molecular Ecology Resources"

DOI: 10.1111/1755-0998.13079

Abstract: Co‐occurrence network analysis based on amplicon sequences is increasingly used to study microbial communities. Patterns of co‐existence or mutual exclusion between pairs of taxa are often interpreted as reflecting positive or negative biological interactions. However,… read more here.

Keywords: assembly processes; microbial occurrence; occurrence networks; occurrence ... See more keywords

Soil Microbial Co‐Occurrence Networks Across Climate and Land Use Gradient in Southern Italy

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0 Published in 2025 at "Environmental Microbiology Reports"

DOI: 10.1111/1758-2229.70093

Abstract: ABSTRACT Despite extensive research on microbiota across land use gradients, it remains unclear if microbial co‐occurrence relationships exhibit consistent patterns. Here, we assessed microbial co‐occurrence networks of seven natural ecosystems— Quercus ilex forest, Fagus sylvatica… read more here.

Keywords: horticulture; soil; land use; microbial occurrence ... See more keywords

Microbial occurrence and symbiont detection in a global sample of lichen metagenomes

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0 Published in 2024 at "PLOS Biology"

DOI: 10.1371/journal.pbio.3002862

Abstract: In lichen research, metagenomes are increasingly being used for evaluating symbiont composition and metabolic potential, but the overall content and limitations of these metagenomes have not been assessed. We reassembled over 400 publicly available metagenomes,… read more here.

Keywords: occurrence; symbiont detection; occurrence symbiont; lichen ... See more keywords