Salivary microbiome profiling reveals a dysbiotic schizophrenia-associated microbiota
Sign Up to like & getrecommendations! Published in 2021 at "NPJ Schizophrenia"
DOI: 10.1038/s41537-021-00180-1
Abstract: Schizophrenia is a debilitating mental disorder and often has a prodromal period, referred to as clinical high risk (CHR) for psychosis, prior to the first episode. The etiology and pathogenesis of schizophrenia remain unclear. Despite… read more here.
Keywords: schizophrenia; profiling reveals; microbiome; salivary microbiome ... See more keywords
Challenges and perspectives of quantitative microbiome profiling in food fermentations.
Sign Up to like & getrecommendations! Published in 2022 at "Critical reviews in food science and nutrition"
DOI: 10.1080/10408398.2022.2147899
Abstract: Spontaneously fermented foods are consumed and appreciated for thousands of years although they are usually produced with fluctuated productivity and quality, potentially threatening both food safety and food security. To guarantee consistent fermentation productivity and… read more here.
Keywords: microbiota; microbiome profiling; food; quantitative microbiome ... See more keywords
Cross-comparison of microbiota in the oropharynx, hypopharyngeal squamous cell carcinoma and their adjacent tissues through quantitative microbiome profiling
Sign Up to like & getrecommendations! Published in 2022 at "Journal of Oral Microbiology"
DOI: 10.1080/20002297.2022.2073860
Abstract: ABSTRACT Aims To clarify the absolute abundance of microbial communities on hypopharyngeal squamous cell carcinoma and their correlation to those in the oropharynx. Methods Clinical data, swabs, and tissue samples from 27 HPSCC patients were… read more here.
Keywords: cell carcinoma; microbiome profiling; hypopharyngeal squamous; squamous cell ... See more keywords
Screen the unforeseen: Microbiome‐profiling for detection of zoonotic pathogens in wild rats
Sign Up to like & getrecommendations! Published in 2022 at "Transboundary and Emerging Diseases"
DOI: 10.1111/tbed.14759
Abstract: Abstract Wild rats can host various zoonotic pathogens. Detection of these pathogens is commonly performed using molecular techniques targeting one or a few specific pathogens. However, this specific way of surveillance could lead to (emerging)… read more here.
Keywords: microbiome profiling; detection zoonotic; 16s rrna; zoonotic pathogens ... See more keywords
Comprehensive Assessment of 16S rRNA Gene Amplicon Sequencing for Microbiome Profiling across Multiple Habitats
Sign Up to like & getrecommendations! Published in 2023 at "Microbiology Spectrum"
DOI: 10.1128/spectrum.00563-23
Abstract: 16S rRNA has long been used as a biomarker to identify distinct microbes from complex communities. However, due to the influence of the amplification region, sequencing type, sequence processing, and reference database, the accuracy of… read more here.
Keywords: 16s rrna; across multiple; rrna gene; microbiome profiling ... See more keywords
IDDF2018-ABS-0199 Gut microbiome profiling of malaysians: a snapshot
Sign Up to like & getrecommendations! Published in 2018 at "Gut"
DOI: 10.1136/gutjnl-2018-iddfabstracts.27
Abstract: Background A balanced commensal gut microbiome is believed to be important to maintain a healthy digestive system, where disruption of this balance or dysbiosis have been associated with diseases such as metabolic syndromes, neurologic disorders… read more here.
Keywords: microbiome; gut microbiome; iddf2018 abs; microbiome profiling ... See more keywords
Abstract 570: High-resolution microbiome profiling of 16SrRNA sequencing data, Microbiome Arrays, and expression arrays identifies differential bacterial communities in head and neck cancer patients treated with surgery, chemo-radiation, and PD-1 checkpoint blockade therapy
Sign Up to like & getrecommendations! Published in 2018 at "Cancer Research"
DOI: 10.1158/1538-7445.am2018-570
Abstract: We have previously shown altered microbiota in saliva from head and neck squamous cell carcinoma (HNSCC) patients, when compared to controls. We now applied high-resolution microbiome profiling (Resphera Insight) to analyze 16S rRNA sequencing and… read more here.
Keywords: high resolution; 16srrna sequencing; resolution microbiome; cancer ... See more keywords
Microbiome profiling of rotavirus infected children suffering from acute gastroenteritis
Sign Up to like & getrecommendations! Published in 2021 at "Gut Pathogens"
DOI: 10.1186/s13099-021-00411-x
Abstract: Background Rotavirus (RV) is a leading cause of pediatric diarrhea and mortality worldwide. The virus causes acute gastroenteritis characterized by moderate to severe vomiting, diarrhea, dehydration, and fever. Microbial dysbiosis caused by RV infection may… read more here.
Keywords: rotavirus; rvv; acute gastroenteritis; gastroenteritis ... See more keywords
How to Count Our Microbes? The Effect of Different Quantitative Microbiome Profiling Approaches
Sign Up to like & getrecommendations! Published in 2020 at "Frontiers in Cellular and Infection Microbiology"
DOI: 10.3389/fcimb.2020.00403
Abstract: Next-generation sequencing (NGS) has instigated the research on the role of the microbiome in health and disease. The compositional nature of such microbiome datasets makes it however challenging to identify those microbial taxa that are… read more here.
Keywords: microbiome; flow cytometry; quantification; quantitative microbiome ... See more keywords