An exploration of the impact of phylogenetic tree structure on NTI and βNTI estimates of community assembly
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DOI: 10.1038/s41598-024-74696-8
Abstract: The nearest taxon index (NTI) and beta nearest taxon index (βNTI) are popular metrics used to infer community assembly in a variety of ecosystems. However, the dependence these metrics have on the underlying phylogenetic tree… read more here.
Keywords: phylogenetic tree; community; community assembly; misclassified sequences ... See more keywords
Detecting and correcting misclassified sequences in the large-scale public databases
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DOI: 10.1093/bioinformatics/btaa586
Abstract: Abstract Motivation As the cost of sequencing decreases, the amount of data being deposited into public repositories is increasing rapidly. Public databases rely on the user to provide metadata for each submission that is prone… read more here.
Keywords: large scale; correcting misclassified; misclassified sequences; sequences large ... See more keywords