Will the emergence of core genome MLST end the role of in silico MLST?
Sign Up to like & getrecommendations! Published in 2018 at "Food microbiology"
DOI: 10.1016/j.fm.2017.09.003
Abstract: The technological advancement of molecular epidemiological analysis using next-generation sequencing (NGS) for foodborne pathogens has a groundbreaking impact over the past three years. In particular, the emergence of cg (core genome) multilocus sequence typing(MLST) has… read more here.
Keywords: mlst; silico mlst; role; core genome ... See more keywords
S8.5c MLST genotyping and phylogenetics of AD-hybrids
Sign Up to like & getrecommendations! Published in 2022 at "Medical Mycology"
DOI: 10.1093/mmy/myac072.s8.5c
Abstract: Abstract S8.5 Genotyping of Cryptococcus neoformans and C. gattii, September 23, 2022, 3:00 PM - 4:30 PM Objectives In a previous study a set of new molecular-type specific primers were designed to apply the standard… read more here.
Keywords: hybrid genotypes; mlst; phylogenetics hybrids; genotyping phylogenetics ... See more keywords
Rapid Identification of Pseudomonas aeruginosa International High-Risk Clones Based on High-Resolution Melting Analysis
Sign Up to like & getrecommendations! Published in 2023 at "Microbiology Spectrum"
DOI: 10.1128/spectrum.03571-22
Abstract: In this study, we designed a novel mini-MLST typing scheme for Pseudomonas aeruginosa. Its great discriminatory power, together with ease of performance and short processing time, makes this approach attractive for prospective typing of large… read more here.
Keywords: pseudomonas aeruginosa; high risk; risk clones; mlst ... See more keywords
Molecular epidemiology of Staphylococcus aureus bacteremia in a single large Minnesota medical center in 2015 as assessed using MLST, core genome MLST and spa typing
Sign Up to like & getrecommendations! Published in 2017 at "PLoS ONE"
DOI: 10.1371/journal.pone.0179003
Abstract: Staphylococcus aureus is a leading cause of bacteremia in hospitalized patients. Whether or not S. aureus bacteremia (SAB) is associated with clonality, implicating potential nosocomial transmission, has not, however, been investigated. Herein, we examined the… read more here.
Keywords: spa typing; mlst; aureus; bacteremia ... See more keywords