Articles with "mobile element" as a keyword



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Library Construction for High-Throughput Mobile Element Identification and Genotyping.

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Published in 2017 at "Methods in molecular biology"

DOI: 10.1007/7651_2015_265

Abstract: Mobile genetic elements are discrete DNA elements that can move around and copy themselves in a genome. As a ubiquitous component of the genome, mobile elements contribute to both genetic and epigenetic variation. Therefore, it… read more here.

Keywords: element; mobile element; library construction; high throughput ... See more keywords
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TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data

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Published in 2020 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkaa074

Abstract: Abstract Alu retrotransposons account for more than 10% of the human genome, and insertions of these elements create structural variants segregating in human populations. Such polymorphic Alus are powerful markers to understand population structure, and… read more here.

Keywords: typete tool; whole genome; tool genotype; genotype mobile ... See more keywords
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Characterizing mobile element insertions in 5675 genomes

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Published in 2022 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkac128

Abstract: Abstract Mobile element insertions (MEIs) are a major class of structural variants (SVs) and have been linked to many human genetic disorders, including hemophilia, neurofibromatosis, and various cancers. However, human MEI resources from large-scale genome… read more here.

Keywords: insertions 5675; element insertions; characterizing mobile; mobile element ... See more keywords
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Pedigree-based estimation of human mobile element retrotransposition rates.

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Published in 2019 at "Genome research"

DOI: 10.1101/gr.247965.118

Abstract: Germline mutation rates in humans have been estimated for a variety of mutation types, including single-nucleotide and large structural variants. Here, we directly measure the germline retrotransposition rate for the three active retrotransposon elements: L1,… read more here.

Keywords: retrotransposition; rate; mobile element; retrotransposition rate ... See more keywords