Molecular typing and whole genome next generation sequencing of human adenovirus 8 strains recovered from four 2012 outbreaks of keratoconjunctivitis in New York State
Sign Up to like & getrecommendations! Published in 2018 at "Journal of Medical Virology"
DOI: 10.1002/jmv.25223
Abstract: Ocular infections caused by human adenovirus (HAdV) are highly contagious. The most severe are usually caused by members of species HAdV‐D (types HAdV8, 19, 37, 53, 54, and 56) and can manifest as epidemic keratoconjunctivitis… read more here.
Keywords: ophthalmology; molecular typing; human adenovirus; york state ... See more keywords
A Real-Time PCR with Melting Curve Analysis for Molecular Typing of Vibrio parahaemolyticus
Sign Up to like & getrecommendations! Published in 2018 at "Current Microbiology"
DOI: 10.1007/s00284-018-1511-3
Abstract: Foodborne disease caused by Vibrio parahaemolyticus is a serious public health problem in many countries. Molecular typing has a great scientific significance and application value for epidemiological research of V. parahaemolyticus. In this study, a… read more here.
Keywords: vibrio parahaemolyticus; real time; time pcr; analysis ... See more keywords
Molecular typing of enteroviruses and parechoviruses in acute flaccid paralysis patients in Iran in 2019.
Sign Up to like & getrecommendations! Published in 2022 at "Archives of virology"
DOI: 10.1007/s00705-022-05359-0
Abstract: Enteroviruses (EVs) and parechoviruses (PeVs) are among the viral pathogens that can cause acute flaccid paralysis (AFP). There is not sufficient information about direct detection of EVs and PeVs in AFP patients in Iran. The… read more here.
Keywords: acute flaccid; molecular typing; afp; patients iran ... See more keywords
Molecular typing of MRSA isolates by spa and PFGE
Sign Up to like & getrecommendations! Published in 2019 at "Journal of King Saud University - Science"
DOI: 10.1016/j.jksus.2018.07.018
Abstract: Abstract Background Methicillin resistant S. aureus (MRSA) strains circulating among populations and crossing borders constitute a major problem for health control and require a fast and simple genotypic approach. Methods In the current study we… read more here.
Keywords: typing mrsa; mrsa isolates; molecular typing; isolates spa ... See more keywords
Isolate independent molecular typing improves the yield of O typing of infections due to Shiga toxin producing Escherichia coli.
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DOI: 10.1016/j.pathol.2020.02.008
Abstract: Molecular screening has increased detection of Shiga-toxin producing Escherichia coli (STEC). However, it is difficult to isolate the organism for epidemiological typing. We applied a molecular method for direct detection of nine O types from… read more here.
Keywords: escherichia coli; toxin producing; producing escherichia; shiga toxin ... See more keywords
Genomic Surveillance and Improved Molecular Typing of Bordetella pertussis Using wgMLST
Sign Up to like & getrecommendations! Published in 2021 at "Journal of Clinical Microbiology"
DOI: 10.1128/jcm.02726-20
Abstract: Multilocus sequence typing (MLST) provides allele-based characterization of bacterial pathogens in a standardized framework. However, classical MLST schemes for Bordetella pertussis, the causative agent of whooping cough, seldom reveal diversity among the small number of… read more here.
Keywords: molecular typing; genome; pertussis; genomic surveillance ... See more keywords
Sequencing Independent Molecular Typing of Staphylococcus aureus Isolates: Approach for Infection Control and Clonal Characterization
Sign Up to like & getrecommendations! Published in 2022 at "Microbiology Spectrum"
DOI: 10.1128/spectrum.01817-21
Abstract: Rapid and cost-effective molecular typing tools for Staphylococcus aureus epidemiological applications such as transmission tracking, source attribution and outbreak investigations are highly desirable. High-resolution melting based methods are effective alternative to those based on sequencing.… read more here.
Keywords: aureus isolates; molecular typing; aureus; approach ... See more keywords
P617 Molecular typing of mycoplasma genitalium shows a diverse epidemic with limited azithromycin resistance in south africa
Sign Up to like & getrecommendations! Published in 2019 at "Sexually Transmitted Infections"
DOI: 10.1136/sextrans-2019-sti.685
Abstract: Background The occurrence of azithromycin resistance in M. genitalium infection is unknown in Africa, where diagnostic resources are limited and STIs are managed syndromically. This study aims to gain insight in the molecular epidemiology including… read more here.
Keywords: south africa; azithromycin resistance; resistance; molecular typing ... See more keywords
Antibiotic resistance, virulence-associated genes analysis and molecular typing of Klebsiella pneumoniae strains recovered from clinical samples
Sign Up to like & getrecommendations! Published in 2021 at "AMB Express"
DOI: 10.1186/s13568-021-01282-w
Abstract: Klebsiella pneumoniae is a multidrug-resistant (MDR) opportunistic pathogen that causes nosocomial infections. Virulence analysis and molecular typing as powerful approaches can provide relevant information on K. pneumoniae infection. In the current study, antibiotic resistance, virulence-associated… read more here.
Keywords: virulence; pneumoniae strains; resistance; molecular typing ... See more keywords
Molecular typing of Cryptosporidium in Israel
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DOI: 10.1371/journal.pone.0219977
Abstract: Cryptosporidium is a protozoan parasite associated with gastrointestinal illness. In immune-compromised individuals, the infection may become life-threatening. Cryptosporidiosis is a mandatory-reported disease but little was known about its prevalence and associated morbidity in Israel. Currently,… read more here.
Keywords: cryptosporidium israel; typing cryptosporidium; israel; epidemiology ... See more keywords
Molecular typing and characterization of a novel genotype of EV-B93 isolated from Tibet, China
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DOI: 10.1371/journal.pone.0237652
Abstract: EV-B93 is a novel serotype within the Enterovirus B species and is uncommon worldwide. Currently, only one full-length genomic sequence (the prototype strain) has been deposited in the GenBank database. In this study, three EV-B93… read more here.
Keywords: novel; tibet b93; chn 1999; b93 ... See more keywords