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Published in 2020 at "Nature biotechnology"
DOI: 10.1038/s41587-020-0549-5
Abstract: The gut microbiome is a malleable microbial community that can remodel in response to various factors, including diet, and contribute to the development of several chronic diseases, including atherosclerosis. We devised an in vitro screening…
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Keywords:
directed remodeling;
mouse gut;
gut microbiome;
development ... See more keywords
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Published in 2022 at "Microbiology Spectrum"
DOI: 10.1128/spectrum.01804-22
Abstract: This report describes a gut engineering technique for investigation of the functions of a specific bacterium. Native phages with host specificity can knock down the corresponding E. coli strain in the mouse gut with limited…
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Keywords:
gut;
bacterium;
abundance;
mouse gut ... See more keywords
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Published in 2022 at "Microbiology Spectrum"
DOI: 10.1128/spectrum.02303-21
Abstract: Conjugative plasmids are involved in horizontal gene transfer in the gut microbiota, which constitutes an important antibiotic resistance gene reservoir. However, the molecular mechanisms used by conjugative plasmids to select recipient bacteria and transfer at…
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Keywords:
dna;
transfer;
microbiota;
gut microbiota ... See more keywords
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Published in 2025 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2025.1584359
Abstract: Background Advancements in sequencing technologies, such as Illumina and Oxford Nanopore Technologies (ONT), have significantly improved microbiome research. However, variations in sequencing platforms, primer selection, and DNA quality may influence microbial diversity assessments, particularly in…
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Keywords:
sequencing technologies;
gut microbiota;
mouse gut;
16s rrna ... See more keywords