Automated multi‐sample DNA extraction for genotyping live Xenopus embryos
Sign Up to like & getrecommendations! Published in 2022 at "Developmental Dynamics"
DOI: 10.1002/dvdy.544
Abstract: Xenopus frogs are used extensively for modeling genetic diseases owing to characteristics such as the abundance of eggs combined with their large size, allowing easy manipulation, and rapid external embryo development enabling the examination of… read more here.
Keywords: multi sample; dna extraction; automated multi; xenopus ... See more keywords
A pipeline for effectively developing highly polymorphic simple sequence repeats markers based on multi‐sample genomic data
Sign Up to like & getrecommendations! Published in 2022 at "Ecology and Evolution"
DOI: 10.1002/ece3.8705
Abstract: Abstract Simple sequence repeats (SSRs) are widely used genetic markers in ecology, evolution, and conservation even in the genomics era, while a general limitation to their application is the difficulty of developing polymorphic SSR markers.… read more here.
Keywords: simple sequence; highly polymorphic; sequence repeats; genomic data ... See more keywords
Multiple multi-sample testing under arbitrary covariance dependency.
Sign Up to like & getrecommendations! Published in 2022 at "Statistics in medicine"
DOI: 10.1002/sim.9761
Abstract: Modern high-throughput biomedical devices routinely produce data on a large scale, and the analysis of high-dimensional datasets has become commonplace in biomedical studies. However, given thousands or tens of thousands of measured variables in these… read more here.
Keywords: multiple multi; testing arbitrary; dependency; covariance ... See more keywords
Plant-RRBS: DNA Methylome Profiling Adjusted to Plant Genomes, Utilizing Efficient Endonuclease Combinations, for Multi-Sample Studies.
Sign Up to like & getrecommendations! Published in 2020 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-0179-2_5
Abstract: In plants, methylation at cytosines often leads to changes in gene expression and inactivation of transposable elements. Changes in cytosine methylation (epimutations) might produce epialleles with distinct phenotypes. We present a genome-wide cytosine methylation profiling… read more here.
Keywords: methylation; multi sample; plant; plant rrbs ... See more keywords
The Stratified Distribution of Dissolved Organic Matter in an AMD Lake Revealed by Multi-sample Evaluation Procedure.
Sign Up to like & getrecommendations! Published in 2021 at "Environmental science & technology"
DOI: 10.1021/acs.est.0c05319
Abstract: As a typical extreme environment, acid mine drainage (AMD) has been extensively studied for its biogeochemical cycle, but little is known about the quality of dissolved organic matter (DOM) in AMD. In this study, DOM… read more here.
Keywords: dom; multi sample; sample evaluation; organic matter ... See more keywords
Detecting anomalous anatomic regions in spatial transcriptomics with STANDS
Sign Up to like & getrecommendations! Published in 2024 at "Nature Communications"
DOI: 10.1038/s41467-024-52445-9
Abstract: Detection and Dissection of Anomalous Tissue Domains (DDATD) from multi-sample spatial transcriptomics (ST) data provides unprecedented opportunities to characterize anomalous tissue domains (ATDs), revealing both population-level and individual-specific pathogenic factors for understanding pathogenic heterogeneities behind… read more here.
Keywords: multi sample; spatial transcriptomics; tissue domains; detecting anomalous ... See more keywords
Exact Likelihood Inference for an Exponential Parameter under a Multi-Sample Type-II Progressive Hybrid Censoring Model
Sign Up to like & getrecommendations! Published in 2021 at "American Journal of Mathematical and Management Sciences"
DOI: 10.1080/01966324.2021.1914251
Abstract: This paper introduces multi-sample Type-II progressive hybrid censoring which allows to incorporate data from k≥2 independently conducted Type-II (progressive) hybrid censored experiments for the f... read more here.
Keywords: type progressive; hybrid censoring; multi sample; progressive hybrid ... See more keywords
OctopuSV and TentacleSV: a one-stop toolkit for multi-sample, cross-platform structural variant comparison and analysis
Sign Up to like & getrecommendations! Published in 2025 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btaf599
Abstract: Abstract Motivation Structural variants (SVs) influence gene regulation, disease progression, and diagnostics, yet integrating SV calls across platforms remains difficult due to inconsistent annotations, limited merging flexibility, and fragmented workflows. Ambiguous breakend (BND) annotations, which… read more here.
Keywords: octopusv tentaclesv; multi sample; analysis; variant ... See more keywords
Abstract 1513: A multi-sample study reveals the evolution and heterogeneity in high-grade serous ovarian cancer
Sign Up to like & getrecommendations! Published in 2023 at "Cancer Research"
DOI: 10.1158/1538-7445.am2023-1513
Abstract: Ovarian cancer is a heterogeneous disease and high-grade serous carcinoma (HGSC) accounts for 70% of them. The pathogenesis of HGSC had remained obscure until the identification of its tubal origin; however, the carcinogenesis process remains… read more here.
Keywords: high grade; grade serous; ovarian cancer; multi sample ... See more keywords
Abstract 2075: Highly customizable multi-sample single cell RNA-Seq pipeline on the CGC
Sign Up to like & getrecommendations! Published in 2023 at "Cancer Research"
DOI: 10.1158/1538-7445.am2023-2075
Abstract: Single-cell (sc) transcriptomics has revolutionized our understanding of the biological characteristics and dynamics of cancer development. It can help us identify rare cell subpopulations and understand mechanisms associated with tumor genesis, progression, and response to… read more here.
Keywords: highly customizable; cell; single cell; multi sample ... See more keywords
A multi-instance multi-sample palmprint identification system
Sign Up to like & getrecommendations! Published in 2019 at "Indonesian Journal of Electrical Engineering and Computer Science"
DOI: 10.11591/ijeecs.v13.i2.pp825-830
Abstract: The multibiometric recognition system considered more reliable than the unimodal biometric recognition system due to the addition of an extra information that increases the discrimination between the classes. In this paper, a multi-sample multi-instance biometric… read more here.
Keywords: system; multi sample; palmprint; identification ... See more keywords