Multilocus approaches reveal underestimated species diversity and inter-specific gene flow in pikas (Ochotona) from southwestern China.
Sign Up to like & getrecommendations! Published in 2017 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2016.11.005
Abstract: The phylogeny of living pikas (Ochotonidae, Ochotona) remains obscure, and pika species diversity in southwestern China has never been well explored. In this study, 96 tissue samples from 11 valid species in three classified subgenera… read more here.
Keywords: species diversity; southwestern china; diversity; multilocus ... See more keywords
Multilocus analysis of the catfish family Trichomycteridae (Teleostei: Ostariophysi: Siluriformes) supporting a monophyletic Trichomycterinae.
Sign Up to like & getrecommendations! Published in 2017 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2017.07.007
Abstract: Trichomycteridae is the second most diverse family of the order Siluriformes, its members are widely distributed through the freshwaters of Central and South America, exhibiting an exceptional ecological and phenotypic disparity. The most diverse subfamily,… read more here.
Keywords: analysis; family; trichomycterinae; multilocus ... See more keywords
High-throughput and efficient multilocus genome-wide association study on longitudinal outcomes
Sign Up to like & getrecommendations! Published in 2020 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btaa120
Abstract: MOTIVATION With the emerging of high-dimensional genomic data, genetic analysis such as genome-wide association studies (GWAS) have played an important role in identifying disease-related genetic variants and novel treatments. Complex longitudinal phenotypes are commonly collected… read more here.
Keywords: genome wide; multilocus; approach; wide association ... See more keywords
Comparing methods for detecting multilocus adaptation with multivariate genotype–environment associations
Sign Up to like & getrecommendations! Published in 2018 at "Molecular Ecology"
DOI: 10.1111/mec.14584
Abstract: Identifying adaptive loci can provide insight into the mechanisms underlying local adaptation. Genotype–environment association (GEA) methods, which identify these loci based on correlations between genetic and environmental data, are particularly promising. Univariate methods have dominated… read more here.
Keywords: genotype environment; multivariate; multilocus; adaptation ... See more keywords
Effective Surveillance Using Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Enterohemorrhagic Escherichia coli O157
Sign Up to like & getrecommendations! Published in 2019 at "Applied and Environmental Microbiology"
DOI: 10.1128/aem.00728-19
Abstract: Intensive surveillance for enterohemorrhagic Escherichia coli (EHEC) serogroup O157 is important to detect outbreaks and to prevent the spread of the bacterium. Recent advances in sequencing technology made molecular surveillance using whole-genome sequence (WGS) realistic.… read more here.
Keywords: genome; surveillance; mlva; enterohemorrhagic escherichia ... See more keywords
Association of multilocus sequencing types and antimicrobial resistance profiles of methicillin-resistant Mammaliicoccus sciuri in animals in Southern Thailand
Sign Up to like & getrecommendations! Published in 2023 at "Veterinary World"
DOI: 10.14202/vetworld.2023.291-295
Abstract: Background and Aim: Mammaliicoccus sciuri, formerly known as Staphylococcus sciuri, is an opportunistic pathogen in the environment, human and animal mucosa, and skin. Although this pathogen is becoming more resistant to drugs and harmful to… read more here.
Keywords: multilocus; southern thailand; mammaliicoccus; resistance ... See more keywords
Multilocus sequence typing of Giardia duodenalis genotypes circulating in humans in a major metropolitan area
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Medicine"
DOI: 10.3389/fmed.2022.976956
Abstract: Giardia duodenalis is an intestinal protozoan parasite of humans and animal hosts and comprises eight microscopically indistinguishable molecularly-diverse lineages designated as assemblages A–H. Assemblages A and B are the primary sources of infections in humans… read more here.
Keywords: multilocus; assemblage; sequence; duodenalis ... See more keywords
High Levels of Admixture in Anopheles gambiae Populations from Côte d’Ivoire Revealed by Multilocus Genotyping
Sign Up to like & getrecommendations! Published in 2022 at "Insects"
DOI: 10.3390/insects13121090
Abstract: Simple Summary Anopheles gambiae and An. coluzzii are two mosquito species with the most prominent role in transmitting malaria parasites to humans in the Afrotropical region. They are morphologically indistinguishable, but their ecological and behavioral… read more here.
Keywords: populations ivoire; multilocus; levels admixture; two species ... See more keywords