Native and exotic Juglans nigra seedlings recruit distinct mycobiomes that differentiate with emergent disease variation
Sign Up to like & getrecommendations! Published in 2025 at "Ecosphere"
DOI: 10.1002/ecs2.70253
Abstract: Under global change, the transformation of landscapes and anthropogenic movement of organisms lead to novel biotic interactions that affect ecosystem health. A prior field‐based metabarcoding survey revealed that Juglans nigra harbors a novel, low‐diversity mycobiome… read more here.
Keywords: walla walla; walla; disease; area ... See more keywords
Profiling the Human Oral Mycobiome in Tissue and Saliva Using ITS2 DNA Metabarcoding Compared to a Fungal-Specific Database.
Sign Up to like & getrecommendations! Published in 2021 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-1518-8_15
Abstract: The advent of high-throughput sequencing has caused a paradigm shift from the one-pathogen one-disease model to the significance of dysbiosis of the oral microbiome, including the oral mycobiome. The oral mycobiome can be profiled by… read more here.
Keywords: oral mycobiome; mycobiome; mycobiome tissue; profiling human ... See more keywords
Fungal feelings in the irritable bowel syndrome: the intestinal mycobiome and abdominal pain
Sign Up to like & getrecommendations! Published in 2023 at "Gut Microbes"
DOI: 10.1080/19490976.2023.2168992
Abstract: ABSTRACT Although the gut microbiota consists of bacteria, viruses, and fungi, most publications addressing the microbiota-gut-brain axis in irritable bowel syndrome (IBS) have a sole focus on bacteria. This may relate to the relatively low… read more here.
Keywords: fungal feelings; intestinal mycobiome; irritable bowel; feelings irritable ... See more keywords
Nanopore Sequencing of Full rRNA Operon Improves Resolution in Mycobiome Analysis and Reveals High Diversity in Both Human Gut and Environments.
Sign Up to like & getrecommendations! Published in 2022 at "Molecular ecology"
DOI: 10.1111/mec.16534
Abstract: High-throughput sequencing has substantially improved our understanding of fungal diversity. However, the short read ( read more here.
Keywords: gut; rrna operon; diversity; resolution ... See more keywords
The air mycobiome is decoupled from the soil mycobiome in the California San Joaquin Valley
Sign Up to like & getrecommendations! Published in 2022 at "Molecular Ecology"
DOI: 10.1111/mec.16640
Abstract: Dispersal is a key force in the assembly of fungal communities and the air is the dominant route of dispersal for most fungi. Understanding the dynamics of airborne fungi is important for determining their source… read more here.
Keywords: joaquin valley; san joaquin; air; mycobiome ... See more keywords
Challenges in capturing the mycobiome from shotgun metagenome data: lack of software and databases
Sign Up to like & getrecommendations! Published in 2025 at "Microbiome"
DOI: 10.1186/s40168-025-02048-3
Abstract: The mycobiome, representing the fungal component of microbial communities, is increasingly acknowledged as an integral part of the gut microbiome. However, research in this area remains relatively limited. The characterization of mycobiome taxa from metagenomic… read more here.
Keywords: abundance; micop; mycobiome; accuracy ... See more keywords
A longitudinal study of the pulmonary mycobiome in subjects with and without chronic obstructive pulmonary disease
Sign Up to like & getrecommendations! Published in 2022 at "PLoS ONE"
DOI: 10.1371/journal.pone.0267195
Abstract: Background Few studies have examined the stability of the pulmonary mycobiome. We report longitudinal changes in the oral and pulmonary mycobiome of participants with and without COPD in a large-scale bronchoscopy study (MicroCOPD). Methods Repeated… read more here.
Keywords: antibiotic use; longitudinal study; mycobiome; pulmonary mycobiome ... See more keywords
Core endophytic mycobiome in Ulmus minor and its relation to Dutch elm disease resistance
Sign Up to like & getrecommendations! Published in 2023 at "Frontiers in Plant Science"
DOI: 10.3389/fpls.2023.1125942
Abstract: The core microbiota of plants exerts key effects on plant performance and resilience to stress. The aim of this study was to identify the core endophytic mycobiome in U. minor stems and disentangle associations between… read more here.
Keywords: core endophytic; endophytic mycobiome; elm; resistance ... See more keywords
The Response of the Mycobiome to the Biofumigation of Replanted Soil in a Fruit Tree Nursery
Sign Up to like & getrecommendations! Published in 2024 at "Agronomy"
DOI: 10.3390/agronomy14091961
Abstract: In a long-term monoculture with fruit trees and tree nurseries, it is necessary to regenerate the soil due to the risk of apple replant disease (ARD). The occurrence of ARD is manifested in the structure… read more here.
Keywords: fruit; mycobiome; mycobiome biofumigation; soil ... See more keywords