Enhanced biodegradation of mixed PAHs by mutated naphthalene 1,2-dioxygenase encoded by Pseudomonas putida strain KD6 isolated from petroleum refinery waste
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DOI: 10.1007/s13205-017-0940-1
Abstract: Polycyclic aromatic hydrocarbons (PAHs) are a group of environmental pollutant that are given top priority to maintain water and soil quality to the most amenable standard. Biodegradation of PAHs by bacteria is the convenient option… read more here.
Keywords: mixed pahs; biodegradation; strain kd6; naphthalene dioxygenase ... See more keywords
Simulation of the Bottleneck Controlling Access into a Rieske Active Site: Predicting Substrates of Naphthalene 1, 2-Dioxygenase
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DOI: 10.1021/acs.jcim.6b00469
Abstract: Naphthalene 1,2-dioxygenase (NDO) has been computationally understudied despite the extensive experimental knowledge obtained for this enzyme, including numerous crystal structures and over 100 demonstrated substrates. In this study, we have developed a substrate prediction model… read more here.
Keywords: simulation bottleneck; active site; site; naphthalene dioxygenase ... See more keywords
One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase
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DOI: 10.1107/s2052252517008223
Abstract: Rieske nonheme iron oxygenases often catalyze different reactions when different substrates bind to them. From the structures of complexes of naphthalene 1,2-dioxygenase with substrates that result in different types of products, it is shown that… read more here.
Keywords: reactions structural; one enzyme; enzyme many; naphthalene dioxygenase ... See more keywords