FSM: Fast and Scalable Network Motif Discovery for Exploring Higher-order Network Organizations.
Sign Up to like & getrecommendations! Published in 2019 at "Methods"
DOI: 10.1016/j.ymeth.2019.07.008
Abstract: Networks exhibit rich and diverse higher-order organizational structures. Network motifs, which are recurring significant patterns of inter-connections, are recognized as fundamental units to study the higher-order organizations of networks. However, the principle of selecting representative… read more here.
Keywords: order; network motif; network; motif discovery ... See more keywords
A Robust Molecular Network Motif for Period-Doubling Devices.
Sign Up to like & getrecommendations! Published in 2018 at "ACS synthetic biology"
DOI: 10.1021/acssynbio.7b00222
Abstract: Life is sustained by a variety of cyclic processes such as cell division, muscle contraction, and neuron firing. The periodic signals powering these processes often direct a variety of other downstream systems, which operate at… read more here.
Keywords: network motif; period; period doubling; biology ... See more keywords
IndeCut evaluates performance of network motif discovery algorithms
Sign Up to like & getrecommendations! Published in 2018 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btx798
Abstract: Motivation Genomic networks represent a complex map of molecular interactions which are descriptive of the biological processes occurring in living cells. Identifying the small over-represented circuitry patterns in these networks helps generate hypotheses about the… read more here.
Keywords: indecut; network motif; network; motif discovery ... See more keywords