Articles with "ontology" as a keyword



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The establishment of BIM‐embedded knowledge‐sharing platform and its learning community model: A case of prefabricated building design

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Published in 2022 at "Computer Applications in Engineering Education"

DOI: 10.1002/cae.22490

Abstract: Building information modeling (BIM) not only can be a medium for 3D display and simulation but also can be embedded in the knowledge ontology to connect more comprehensive information. Despite the advantages of the BIM‐embedded… read more here.

Keywords: embedded knowledge; learning community; bim embedded; ontology ... See more keywords
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Empirical and philosophical problems with the subspecies rank

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Published in 2022 at "Ecology and Evolution"

DOI: 10.1002/ece3.9069

Abstract: Abstract Species‐level taxonomy derives from empirical sources (data and techniques) that assess the existence of spatiotemporal evolutionary lineages via various species “concepts.” These concepts determine if observed lineages are independent given a particular methodology and… read more here.

Keywords: reproductive isolation; species concept; species concepts; ontology ... See more keywords
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Using Fuzzy Ontology to Improve Similarity Assessment: Method and Evaluation

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Published in 2017 at "International Journal of Intelligent Systems"

DOI: 10.1002/int.21895

Abstract: Assessing semantic similarity is a fundamental requirement for many AI applications. Crisp ontology (CO) is one of the knowledge representation tools that can be used for this purpose. Thanks to the development of semantic web,… read more here.

Keywords: ontology; similarity; similarity assessment; fuzzy ontology ... See more keywords
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OLS Client and OLS Dialog: Open Source Tools to Annotate Public Omics Datasets

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Published in 2017 at "Proteomics"

DOI: 10.1002/pmic.201700244

Abstract: The availability of user‐friendly software to annotate biological datasets and experimental details is becoming essential in data management practices, both in local storage systems and in public databases. The Ontology Lookup Service (OLS, http://www.ebi.ac.uk/ols) is… read more here.

Keywords: version; ontology; ols dialog; open source ... See more keywords
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Argument ontology for describing scientific articles: A statistical study based on articles from two research areas

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Published in 2019 at "Proceedings of the Association for Information Science and Technology"

DOI: 10.1002/pra2.204

Abstract: The research provides (1) an account of the construction of a new Scientific Argument Ontology (SAO), (2) a statistical analysis of 40 articles from both fields of Library and Information Science and Biomedical Research, and… read more here.

Keywords: describing scientific; research; ontology; argument ontology ... See more keywords
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The hitchhiker's guide to scholarly research integrity

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Published in 2020 at "Proceedings of the Association for Information Science and Technology"

DOI: 10.1002/pra2.223

Abstract: The pursuit of truth in research should be both an ideal in aspiration and also a reality in practice. The PORTAL‐DOORS Project (PDP) strives to promote creative authenticity, fair citation, and adherence to integrity and… read more here.

Keywords: dream; research; ontology; hitchhiker guide ... See more keywords
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Modeling and representation of intangible cultural heritage knowledge using linked data and ontology

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Published in 2019 at "Proceedings of the Association for Information Science and Technology"

DOI: 10.1002/pra2.39

Abstract: Intangible cultural heritage (ICH) contains rich knowledge, and the effective organization and management of ICH knowledge is the foundation for the protection and inheritance of ICH. The development of semantic Web technology changes the way… read more here.

Keywords: linked data; ontology; ich knowledge; knowledge ... See more keywords
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Mining adverse events in large frequency tables with ontology, with an application to the vaccine adverse event reporting system

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Published in 2023 at "Statistics in Medicine"

DOI: 10.1002/sim.9684

Abstract: Many statistical methods have been applied to VAERS (vaccine adverse event reporting system) database to study the safety of COVID‐19 vaccines. However, none of these methods considered the adverse event (AE) ontology. The AE ontology… read more here.

Keywords: event reporting; vaccine adverse; adverse event; ontology ... See more keywords
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A Gene Ontology Tutorial in Python.

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Published in 2017 at "Methods in molecular biology"

DOI: 10.1007/978-1-4939-3743-1_16

Abstract: This chapter is a tutorial on using Gene Ontology resources in the Python programming language. This entails querying the Gene Ontology graph, retrieving Gene Ontology annotations, performing gene enrichment analyses, and computing basic semantic similarity… read more here.

Keywords: ontology; ontology tutorial; tutorial python; biology ... See more keywords
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Integrating Bio-ontologies and Controlled Clinical Terminologies: From Base Pairs to Bedside Phenotypes.

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Published in 2017 at "Methods in molecular biology"

DOI: 10.1007/978-1-4939-3743-1_20

Abstract: Electronic Health Records (EHR) are inherently complex and diverse and cannot be readily integrated and analyzed. Analogous to the Gene Ontology, controlled clinical terminologies were created to facilitate the standardization and integration of medical concepts… read more here.

Keywords: integrating bio; ontology; ontologies controlled; controlled clinical ... See more keywords
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Evaluating Computational Gene Ontology Annotations.

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Published in 2017 at "Methods in molecular biology"

DOI: 10.1007/978-1-4939-3743-1_8

Abstract: Two avenues to understanding gene function are complementary and often overlapping: experimental work and computational prediction. While experimental annotation generally produces high-quality annotations, it is low throughput. Conversely, computational annotations have broad coverage, but the… read more here.

Keywords: quality; ontology; evaluating computational; computational gene ... See more keywords