The Ecology and Evolution of Pangenomes
Sign Up to like & getrecommendations! Published in 2019 at "Current Biology"
DOI: 10.1016/j.cub.2019.08.012
Abstract: Since the first genome-scale comparisons, it has been evident that the genomes of many species are unbound by strict vertical descent: Large differences in gene content can occur among genomes belonging to the same prokaryotic… read more here.
Keywords: ecology evolution; evolution pangenomes; pangenome; gene ... See more keywords
Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement
Sign Up to like & getrecommendations! Published in 2019 at "Trends in Plant Science"
DOI: 10.1016/j.tplants.2019.10.012
Abstract: The pangenome provides genomic variations in the cultivated gene pool for a given species. However, as the crop’s gene pool comprises many species, especially wild relatives with diverse genetic stock, here we suggest using accessions… read more here.
Keywords: super pangenome; pangenome integrating; pangenome; crop ... See more keywords
Differentiating Closely Affiliated Dehalococcoides Lineages by a Novel Genetic Marker Identified via Computational Pangenome Analysis
Sign Up to like & getrecommendations! Published in 2021 at "Applied and Environmental Microbiology"
DOI: 10.1128/aem.02181-21
Abstract: The challenge of discriminating between phylogenetically similar but functionally distinct bacterial lineages is particularly relevant to the development of technologies seeking to exploit the metabolic or physiological characteristics of specific members of bacterial genera. A… read more here.
Keywords: marker; bnr; approach; genetic marker ... See more keywords
Pangenomics in Microbial and Crop Research: Progress, Applications, and Perspectives
Sign Up to like & getrecommendations! Published in 2022 at "Genes"
DOI: 10.3390/genes13040598
Abstract: Advances in sequencing technologies and bioinformatics tools have fueled a renewed interest in whole genome sequencing efforts in many organisms. The growing availability of multiple genome sequences has advanced our understanding of the within-species diversity,… read more here.
Keywords: crop research; microbial crop; pangenome; pangenomics microbial ... See more keywords