Communication Lower-Bounds for Distributed-Memory Computations for Mass Spectrometry based Omics Data
Sign Up to like & getrecommendations! Published in 2022 at "Journal of parallel and distributed computing"
DOI: 10.1016/j.jpdc.2021.11.001
Abstract: Mass spectrometry (MS) based omics data analysis require significant time and resources. To date, few parallel algorithms have been proposed for deducing peptides from mass spectrometry-based data. However, these parallel algorithms were designed, and developed… read more here.
Keywords: based omics; spectrometry based; mass spectrometry; communication ... See more keywords
Critique of “Planetary Normal Mode Computation: Parallel Algorithms, Performance, and Reproducibility” by SCC Team From ETH Zurich
Sign Up to like & getrecommendations! Published in 2021 at "IEEE Transactions on Parallel and Distributed Systems"
DOI: 10.1109/tpds.2021.3050500
Abstract: This report analyzes the reproducibility of the article “Computing Planetary Interior Normal Modes with A Highly Parallel Polynomial Filtering Eigensolver” by Jia Shi et al. (Shi, 2018). To reproduce the results we perform different weak… read more here.
Keywords: parallel algorithms; critique planetary; computation parallel; normal mode ... See more keywords
Multi-core and many-core SPMD parallel algorithms for construction of basins of attraction
Sign Up to like & getrecommendations! Published in 2019 at "Journal of Theoretical and Applied Mechanics"
DOI: 10.15632/jtam-pl/112463
Abstract: Construction of basins of attraction, used for the analysis of nonlinear dynamical systems which present multistability, are computationaly very expensive. Because of the long runtime needed, in many cases, the construction of basins does not… read more here.
Keywords: construction basins; construction; parallel algorithms; basins attraction ... See more keywords
A Comparison of Parallel Algorithms for Numerical Solution of Parabolic Problems with Fractional Power Elliptic Operators
Sign Up to like & getrecommendations! Published in 2022 at "Axioms"
DOI: 10.3390/axioms11030098
Abstract: In this article we construct parallel solvers analyze the efficiency and accuracy of general parallel solvers for three dimensional parabolic problems with the fractional power of elliptic operators. The proposed discrete method are targeted for… read more here.
Keywords: problems fractional; elliptic operators; fractional power; parallel algorithms ... See more keywords
BooLSPLG: A Library with Parallel Algorithms for Boolean Functions and S-Boxes for GPU
Sign Up to like & getrecommendations! Published in 2023 at "Mathematics"
DOI: 10.3390/math11081864
Abstract: In this paper, we present a library with sequential and parallel functions for computing some of the most important cryptographic characteristics of Boolean and vectorial Boolean functions. The library implements algorithms to calculate the nonlinearity,… read more here.
Keywords: vectorial boolean; parallel algorithms; parallel; library parallel ... See more keywords