A new sequence based encoding for prediction of host-pathogen protein interactions
Sign Up to like & getrecommendations! Published in 2019 at "Computational biology and chemistry"
DOI: 10.1016/j.compbiolchem.2018.12.001
Abstract: Pathogen-host interactions are very important to figure out the infection process at the molecular level, where pathogen proteins physically bind to human proteins to manipulate critical biological processes in the host cell. Data scarcity and… read more here.
Keywords: pathogen; pathogen host; sequence based; host ... See more keywords
The Pathogen-Host Interface in Three Dimensions: Correlative FIB/SEM Applications.
Sign Up to like & getrecommendations! Published in 2019 at "Trends in microbiology"
DOI: 10.1016/j.tim.2018.11.011
Abstract: Pathogens survive and propagate within host cells through a wide array of complex interactions. Tracking the molecular and cellular events by multidimensional fluorescence microscopy has been a widespread tool for research on intracellular pathogens. Through… read more here.
Keywords: pathogen host; electron microscopy; fib sem; microscopy ... See more keywords
New feature extraction from phylogenetic profiles improved the performance of pathogen-host interactions
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Cellular and Infection Microbiology"
DOI: 10.3389/fcimb.2022.931072
Abstract: Motivation The understanding of pathogen-host interactions (PHIs) is essential and challenging research because this potentially provides the mechanism of molecular interactions between different organisms. The experimental exploration of PHI is time-consuming and labor-intensive, and computational… read more here.
Keywords: host interactions; pathogen host; phylogenetic profiles; structure based ... See more keywords
A Bipartite Network Module-Based Project to Predict Pathogen–Host Association
Sign Up to like & getrecommendations! Published in 2019 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2019.01357
Abstract: Pathogen–host interactions play an important role in understanding the mechanism by which a pathogen can infect its host. Some approaches for predicting pathogen–host association have been developed, but prediction accuracy is still low. In this… read more here.
Keywords: bipartite network; pathogen; pathogen host; association ... See more keywords