Strategies for reducing per‐sample costs in target capture sequencing for phylogenomics and population genomics in plants
Sign Up to like & getrecommendations! Published in 2020 at "Applications in Plant Sciences"
DOI: 10.1002/aps3.11337
Abstract: The reduced cost of high‐throughput sequencing and the development of gene sets with wide phylogenetic applicability has led to the rise of sequence capture methods as a plausible platform for both phylogenomics and population genomics… read more here.
Keywords: sample; genomics plants; population genomics; phylogenomics population ... See more keywords
Optimal analytical strategies for sensitive and quantitative phosphoproteomics using TMT‐based multiplexing
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DOI: 10.1002/pmic.202100245
Abstract: In large‐scale quantitative mass spectrometry (MS)‐based phosphoproteomics, isobaric labeling with tandem mass tags (TMTs) coupled with offline high‐pH reversed‐phase peptide chromatographic fractionation maximizes depth of coverage. To investigate to what extent limited sample amounts affect… read more here.
Keywords: tmt based; sample; peptide input; per sample ... See more keywords
Identification of selected primary bloodstream infection pathogens in patients attending Kisii level five and Homa Bay county hospitals
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DOI: 10.12688/f1000research.26300.1
Abstract: Background: Bloodstream infection (BSI) contributes to a substantial proportion of mortality in sub-Saharan Africa and is marked by the presence of bacterial and/or fungal microorganisms in the blood. Because BSI can be life threatening, it… read more here.
Keywords: sample; bloodstream infection; per sample; accuracy sensitivity ... See more keywords
Genetic Diversity of Listeria monocytogenes Isolated From Three Commercial Tree Fruit Packinghouses and Evidence of Persistent and Transient Contamination
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DOI: 10.3389/fmicb.2021.756688
Abstract: Whole genome analysis was performed on 501 isolates obtained from a previous survey which recovered 139 positive environmental sponge samples (i.e., up to 4 isolates per sample) from a total of 719 samples collected at… read more here.
Keywords: contamination; facility; per sample; diversity ... See more keywords