SEPA: Signalling entropy-based algorithm to evaluate personalized pathway activation for survival analysis on pan-cancer data.
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac122
Abstract: MOTIVATION Biomarkers with prognostic ability and biological interpretability can be used to support decision-making in the survival analysis. Genes usually form functional modules to play synergistic roles, such as pathways. Predicting significant features from the… read more here.
Keywords: pathway activation; activation; entropy; personalized pathway ... See more keywords
Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data
Sign Up to like & getrecommendations! Published in 2018 at "GigaScience"
DOI: 10.1093/gigascience/giy136
Abstract: Abstract Lilikoi (the Hawaiian word for passion fruit) is a new and comprehensive R package for personalized pathway-based classification modeling using metabolomics data. Four basic modules are presented as the backbone of the package: feature… read more here.
Keywords: classification; package personalized; classification modeling; pathway based ... See more keywords