Articles with "predicted structures" as a keyword



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Enhancing Protein Function Prediction Performance by Utilizing AlphaFold-Predicted Protein Structures

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Published in 2022 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.2c00885

Abstract: The structure of a protein is of great importance in determining its functionality, and this characteristic can be leveraged to train data-driven prediction models. However, the limited number of available protein structures severely limits the… read more here.

Keywords: protein structures; predicted structures; function prediction; alphafold predicted ... See more keywords
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Reply to the ‘Comment on “Polymorphism of levofloxacin: structure, properties and phase transformation”’ by Tejender S. Thakur, CrystEngComm, 2020, 22, DOI: 10.1039/C9CE01400D

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Published in 2020 at "CrystEngComm"

DOI: 10.1039/c9ce01841g

Abstract: Full comparison of the experimentally determined crystal structure of the levofloxacin anhydrous α form from single-crystal X-ray diffraction with all the predicted structures from the CSP approach was supplemented. The previous conclusion in regard to… read more here.

Keywords: crystengcomm; predicted structures; reply comment; comment polymorphism ... See more keywords
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AlloMAPS 2: allosteric fingerprints of the AlphaFold and Pfam-trRosetta predicted structures for engineering and design

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Published in 2022 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkac828

Abstract: Abstract AlloMAPS 2 is an update of the Allosteric Mutation Analysis and Polymorphism of Signalling database, which contains data on allosteric communication obtained for predicted structures in the AlphaFold database (AFDB) and trRosetta-predicted Pfam domains.… read more here.

Keywords: predicted structures; allomaps allosteric; design; trrosetta predicted ... See more keywords