Articles with "probis dock" as a keyword



ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand-Protein Binding Sites for Drug Design

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Published in 2021 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.1c00454

Abstract: We have developed a new system, ProBiS-Dock, which can be used to determine the different types of protein binding sites for small ligands. The binding sites identified this way are then used to construct a… read more here.

Keywords: dock database; binding sites; probis dock; database ... See more keywords
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ProBiS-Dock: A Hybrid Multitemplate Homology Flexible Docking Algorithm Enabled by Protein Binding Site Comparison

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Published in 2022 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.1c01176

Abstract: The protein data bank (PDB) is a rich source of protein ligand structures, but ligands are not explicitly used in current docking algorithms. We have developed ProBiS-Dock, a docking algorithm complementary to the ProBiS-Dock Database… read more here.

Keywords: probis dock; docking algorithm; binding site; dock ... See more keywords