Distance geometry and protein loop modeling
Sign Up to like & getrecommendations! Published in 2022 at "Journal of Computational Chemistry"
DOI: 10.1002/jcc.26796
Abstract: Due to the role of loops in protein function, loop modeling is an important problem in computational biology. We present a new approach to loop modeling based on a combinatorial version of distance geometry, where… read more here.
Keywords: protein loop; geometry; loop modeling; geometry protein ... See more keywords
Protein Loop Modeling Using AlphaFold2.
Sign Up to like & getrecommendations! Published in 2023 at "IEEE/ACM transactions on computational biology and bioinformatics"
DOI: 10.1109/tcbb.2023.3264899
Abstract: The functions of proteins are largely determined by their three-dimensional (3D) structures. Loop modeling tries to predict the conformation of a relatively short stretch of protein backbone and sidechain. It is a difficult problem due… read more here.
Keywords: loop modeling; loop; protein loop; using alphafold2 ... See more keywords