SCOUT: A new algorithm for the inference of pseudo-time trajectory using single-cell data
Sign Up to like & getrecommendations! Published in 2019 at "Computational biology and chemistry"
DOI: 10.1016/j.compbiolchem.2019.03.013
Abstract: Single cell technology is a powerful tool to reveal intercellular heterogeneity and discover cellular developmental processes. When analyzing the complexity of cellular dynamics and variability, it is important to construct a pseudo-time trajectory using single-cell… read more here.
Keywords: single cell; cell; pseudo time; time trajectory ... See more keywords
Pseudo Time-Slice Construction Using a Variable Moving Window k Nearest Neighbor Rule for Sequential Uneven Phase Division and Batch Process Monitoring
Sign Up to like & getrecommendations! Published in 2017 at "Industrial & Engineering Chemistry Research"
DOI: 10.1021/acs.iecr.6b03743
Abstract: Multiphase characteristics and uneven-length batch duration have been two critical issues to be addressed for batch process monitoring. To handle these issues, a variable moving window-k nearest neighbor (VMW-kNN) based local modeling, irregular phase division,… read more here.
Keywords: nearest neighbor; phase division; time; variable moving ... See more keywords
LISA: Accurate reconstruction of cell trajectory and pseudo-time for massive single cell RNA-seq data
Sign Up to like & getrecommendations! Published in 2019 at "Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing"
DOI: 10.1142/9789813279827_0031
Abstract: Cell trajectory reconstruction based on single cell RNA sequencing is important for obtaining the landscape of different cell types and discovering cell fate transitions. Despite intense effort, analyzing massive single cell RNA-seq datasets is still… read more here.
Keywords: single cell; cell; pseudo time; cell trajectory ... See more keywords