FIBOS: R and python packages for analyzing protein packing and structure
Sign Up to like & getrecommendations! Published in 2024 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btaf434
Abstract: Summary Advances in prediction of the 3D structures of most known proteins through machine learning methods have achieved unprecedented accuracies. However, although these computed structure models (CSMs) are overall remarkably good, they still challenge accuracy… read more here.
Keywords: fibos python; protein packing; packing; python ... See more keywords
graphkernels: R and Python packages for graph comparison
Sign Up to like & getrecommendations! Published in 2018 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btx602
Abstract: Abstract Summary Measuring the similarity of graphs is a fundamental step in the analysis of graph-structured data, which is omnipresent in computational biology. Graph kernels have been proposed as a powerful and efficient approach to… read more here.
Keywords: graph comparison; graphkernels python; python packages; graph kernels ... See more keywords