Quantitative Modeling of Nucleosome Unwrapping from Both Ends.
Sign Up to like & getrecommendations! Published in 2019 at "Biophysical journal"
DOI: 10.1016/j.bpj.2019.09.048
Abstract: In eukaryotic cells, DNA is packaged into chromatin where nucleosomes are the basic packaging unit. Important cellular processes including gene expression, DNA replication, and DNA repair require nucleosomal DNA to be unwrapped so that functional… read more here.
Keywords: dna; nucleosome unwrapping; nucleosomal dna; dna origami ... See more keywords
Quantitative modeling of energy dissipation in Arabidopsis thaliana
Sign Up to like & getrecommendations! Published in 2018 at "Environmental and Experimental Botany"
DOI: 10.1016/j.envexpbot.2018.03.021
Abstract: Abstract In photosynthesis, solar energy is absorbed and converted into chemical energy. Chlorophyll embedded in proteins absorb light and transfer excitation energy to reaction centers where charge separation occurs. However, the solar flux incident on… read more here.
Keywords: arabidopsis thaliana; energy; energy dissipation; quantitative modeling ... See more keywords
Quantitative modeling of gene networks of biological systems using fuzzy Petri nets and fuzzy sets
Sign Up to like & getrecommendations! Published in 2018 at "Journal of King Saud University - Science"
DOI: 10.1016/j.jksus.2017.01.005
Abstract: Abstract Quantitative demonstrating of organic frameworks has turned into an essential computational methodology in the configuration of novel and investigation of existing natural frameworks. Be that as it may, active information that portrays the framework's… read more here.
Keywords: methodology; information; modeling gene; biological systems ... See more keywords
Quantitative modeling of the function of kinetically driven transcriptional riboswitches.
Sign Up to like & getrecommendations! Published in 2020 at "Journal of theoretical biology"
DOI: 10.1016/j.jtbi.2020.110406
Abstract: Riboswitches are cis-acting regulatory mRNA elements in bacteria, that modulate the expression of their associated genes in response to a cognate metabolite, operating either on the level of translation or transcription. Transcriptional riboswitches have to… read more here.
Keywords: transcription; transcriptional riboswitches; quantitative modeling; transcription rates ... See more keywords
Tip-Enhanced Raman Voltammetry: Coverage Dependence and Quantitative Modeling.
Sign Up to like & getrecommendations! Published in 2017 at "Nano letters"
DOI: 10.1021/acs.nanolett.6b04868
Abstract: Electrochemical atomic force microscopy tip-enhanced Raman spectroscopy (EC-AFM-TERS) was employed for the first time to observe nanoscale spatial variations in the formal potential, E0', of a surface-bound redox couple. TERS cyclic voltammograms (TERS CVs) of… read more here.
Keywords: enhanced raman; tip enhanced; coverage; quantitative modeling ... See more keywords
Quantitative modeling of the impact of facemasks and associated leakage on the airborne transmission of SARS-CoV-2
Sign Up to like & getrecommendations! Published in 2021 at "Scientific Reports"
DOI: 10.1038/s41598-021-98895-9
Abstract: The ongoing worldwide outbreak of COVID-19 has set personal protective equipment in the spotlight. A significant number of countries impose the use of facemasks in public spaces and encourage it in the private sphere. Even… read more here.
Keywords: modeling impact; protection; community masks; quantitative modeling ... See more keywords
Quantitative modeling of pentose phosphate pathway response to oxidative stress reveals a cooperative regulatory strategy
Sign Up to like & getrecommendations! Published in 2022 at "iScience"
DOI: 10.1101/2022.02.04.478659
Abstract: Living cells use signaling and regulatory mechanisms to adapt to environmental stresses. In the case of oxidative stress due for instance to hydrogen peroxide exposure, the adaptation response relies on co-regulation of enzymes in both… read more here.
Keywords: quantitative modeling; oxidative stress; pentose phosphate; response ... See more keywords
Quantitative Modeling and Analytical Calculation of Anelasticity for a Cyber-Physical System
Sign Up to like & getrecommendations! Published in 2020 at "IEEE Transactions on Systems, Man, and Cybernetics: Systems"
DOI: 10.1109/tsmc.2018.2861918
Abstract: This paper investigates resource provisioning in cyber-physical systems (CPSs) by developing a new definition of anelasticity. A flat semi-dormant multicontroller (FSDMC) model is established on a special type of CPS platform named arbitrated networked control… read more here.
Keywords: system; quantitative modeling; cyber physical; modeling analytical ... See more keywords
Quantitative modeling of near-field interactions incorporating polaritonic and electrostatic effects.
Sign Up to like & getrecommendations! Published in 2022 at "Optics express"
DOI: 10.1364/oe.442305
Abstract: As scattering-scanning near-field optical microscopy (s-SNOM) continues to grow in prominence, there has been great interest in modeling the near-field light-matter interaction to better predict experimental results. Both analytical and numerical models have been developed… read more here.
Keywords: near field; quantitative modeling; interactions incorporating; field interactions ... See more keywords
Quantitative modeling of the effect of antigen dosage on B-cell affinity distributions in maturating germinal centers
Sign Up to like & getrecommendations! Published in 2020 at "eLife"
DOI: 10.7554/elife.55678
Abstract: Affinity maturation is a complex dynamical process allowing the immune system to generate antibodies capable of recognizing antigens. We introduce a model for the evolution of the distribution of affinities across the antibody population in… read more here.
Keywords: modeling effect; antigen dosage; quantitative modeling; affinity ... See more keywords