Articles with "rad seq" as a keyword



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Evolution of a hybrid zone of two willow species (Salix L.) in the European Alps analyzed by RAD‐seq and morphometrics

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Published in 2023 at "Ecology and Evolution"

DOI: 10.1002/ece3.9700

Abstract: Abstract Natural hybridization of plants can result in many outcomes with several evolutionary consequences, such as hybrid speciation and introgression. Natural hybrid zones can arise in mountain systems as a result of fluctuating climate during… read more here.

Keywords: zone two; hybrid zone; zone; european alps ... See more keywords
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Host‐targeted RAD‐Seq reveals genetic changes in the coral Oculina patagonica associated with range expansion along the Spanish Mediterranean coast

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Published in 2018 at "Molecular Ecology"

DOI: 10.1111/mec.14702

Abstract: Many organisms are expanding their ranges in response to changing environmental conditions. Understanding the patterns of genetic diversity and adaptation along an expansion front is crucial to assessing a species’ long‐term success. While next‐generation sequencing… read more here.

Keywords: expansion; spanish mediterranean; oculina patagonica; patagonica ... See more keywords
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Application of Restriction Site-Associated DNA Sequencing (RAD-Seq) for Copy Number Variation and Triploidy Detection in Human.

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Published in 2021 at "Cytogenetic and genome research"

DOI: 10.1159/000518930

Abstract: At present, low-pass whole-genome sequencing (WGS) is frequently used in clinical research and in the screening of copy number variations (CNVs). However, there are still some challenges in the detection of triploids. Restriction site-associated DNA… read more here.

Keywords: seq; detection; wgs; rad seq ... See more keywords
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Diversification of chiles (Capsicum, Solanaceae) through time and space: New insights from genome-wide RAD-seq data

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Published in 2022 at "Frontiers in Genetics"

DOI: 10.3389/fgene.2022.1030536

Abstract: Capsicum L. encompasses 43 American species, including the five domesticated worldwide consumed sweet and hot chiles. This study presents new, updated and age-calibrated phylogenetic hypothesis on the genus evolution incorporating nearly all currently accepted Capsicum… read more here.

Keywords: genome wide; diversification; capsicum; wide rad ... See more keywords
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Phylogeny of Hawaiian Melicope (Rutaceae): RAD-seq Resolves Species Relationships and Reveals Ancient Introgression

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Published in 2019 at "Frontiers in Plant Science"

DOI: 10.3389/fpls.2019.01074

Abstract: Hawaiian Melicope are one of the major adaptive radiations of the Hawaiian Islands comprising 54 endemic species. The lineage is monophyletic with an estimated crown age predating the rise of the current high islands. Phylogenetic… read more here.

Keywords: melicope rutaceae; melicope; phylogeny hawaiian; introgression ... See more keywords
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DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics

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Published in 2020 at "PeerJ"

DOI: 10.7717/peerj.9291

Abstract: Restriction site Associated DNA Sequencing (RAD-Seq) is a technique characterized by the sequencing of specific loci along the genome that is widely employed in the field of evolutionary biology since it allows to exploit variants… read more here.

Keywords: variants rad; rad novo; rad seq; discosnp rad ... See more keywords