Long-Read Metagenomics Improves the Recovery of Viral Diversity from Complex Natural Marine Samples
Sign Up to like & getrecommendations! Published in 2022 at "mSystems"
DOI: 10.1128/msystems.00192-22
Abstract: We explored the vast genetic diversity of environmental viruses by using a combination of cellular metagenome (as opposed to virome) sequencing using high-fidelity long-read sequences (in this case, PacBio CCS). This approach resulted in the… read more here.
Keywords: read metagenomics; diversity; approach; viral diversity ... See more keywords
Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces
Sign Up to like & getrecommendations! Published in 2021 at "BMC Genomics"
DOI: 10.1186/s12864-021-07607-0
Abstract: Background Long-read sequencing in metagenomics facilitates the assembly of complete genomes out of complex microbial communities. These genomes include essential biologic information such as the ribosomal genes or the mobile genetic elements, which are usually… read more here.
Keywords: long read; read metagenomics; single contig; canine feces ... See more keywords
Insights into ecological roles of uncultivated bacteria in Katase hot spring sediment from long-read metagenomics
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2022.1045931
Abstract: Diverse yet-uncultivated bacteria and archaea, i.e., microbial dark matter, are present in terrestrial hot spring environments. Numerous metagenome-assembled genomes (MAGs) of these uncultivated prokaryotes by short-read metagenomics have been reported so far, suggesting their metabolic… read more here.
Keywords: spring sediment; read metagenomics; spring; uncultivated bacteria ... See more keywords