Simultaneous compression of multiple error-corrected short-read sets for faster data transmission and better de novo assemblies.
Sign Up to like & getrecommendations! Published in 2022 at "Briefings in functional genomics"
DOI: 10.1093/bfgp/elac016
Abstract: Next-Generation Sequencing has produced incredible amounts of short-reads sequence data for de novo genome assembly over the last decades. For efficient transmission of these huge datasets, high-performance compression algorithms have been intensively studied. As both… read more here.
Keywords: short read; error correction; error; read sets ... See more keywords
Recovery of small plasmid sequences via Oxford Nanopore sequencing.
Sign Up to like & getrecommendations! Published in 2021 at "Microbial genomics"
DOI: 10.1099/mgen.0.000631
Abstract: Oxford Nanopore Technologies (ONT) sequencing platforms currently offer two approaches to whole-genome native-DNA library preparation: ligation and rapid. In this study, we compared these two approaches for bacterial whole-genome sequencing, with a specific aim of… read more here.
Keywords: read sets; ligation; plasmid sequences; oxford nanopore ... See more keywords