Recognition of protein allosteric states and residues: Machine learning approaches
Sign Up to like & getrecommendations! Published in 2018 at "Journal of Computational Chemistry"
DOI: 10.1002/jcc.25218
Abstract: Allostery is a process by which proteins transmit the effect of perturbation at one site to a distal functional site upon certain perturbation. As an intrinsically global effect of protein dynamics, it is difficult to… read more here.
Keywords: protein; recognition protein; machine learning; allosteric states ... See more keywords
TNF upregulates peptidoglycan recognition protein 1 in esophageal cancer cells to clear the path to its signaling: Making the "enemy" a friend.
Sign Up to like & getrecommendations! Published in 2022 at "Archives of biochemistry and biophysics"
DOI: 10.1016/j.abb.2022.109192
Abstract: TNF, CCN1, and peptidoglycan recognition protein 1 (PGLYRP1) are often found together in the inflammatory tissue. While TNF and CCN1 promote tissue regeneration, PGLYRP1 protects it from bacterial infection. In fibroblasts, CCN1 was reported to… read more here.
Keywords: cancer cells; recognition protein; pglyrp1; tnf ... See more keywords
Peptidoglycan Recognition Protein S5 of Bombyx mori Facilitates the Proliferation of Bombyx mori Cypovirus 1.
Sign Up to like & getrecommendations! Published in 2023 at "Journal of agricultural and food chemistry"
DOI: 10.1021/acs.jafc.3c00927
Abstract: Bombyx mori cypovirus 1 (BmCPV1), a primary pathogen of the silkworm, is a typical dsRNA virus belonging to the Reoviridae family. In this study, a total of 2520 differentially expressed genes (DEGs) were identified by… read more here.
Keywords: recognition protein; peptidoglycan recognition; bombyx mori; bmcpv1 ... See more keywords
Evaluation of β-1,3-Glucan Recognition Protein Binding to β-1,3-Glucan and β-1,3-Glucan/DNA Complexes.
Sign Up to like & getrecommendations! Published in 2025 at "Glycobiology"
DOI: 10.1093/glycob/cwaf070
Abstract: Although the interaction between β-1,3-glucans (BG) and β-1,3-glucan recognition protein (BGRP) derived from insects is well established, the binding interaction and recognition mechanism of BG when complexed with deoxyadenosine (dA) or CpG oligodeoxynucleotides (CpG) remain… read more here.
Keywords: recognition protein; recognition; bgrp; glucan recognition ... See more keywords
Retracted: Recognition of Protein Network for Bioinformatics Knowledge Analysis Using Support Vector Machine
Sign Up to like & getrecommendations! Published in 2024 at "BioMed Research International"
DOI: 10.1155/2024/9851968
Abstract: [This retracts the article DOI: 10.1155/2022/2273648.]. read more here.
Keywords: recognition protein; protein network; bioinformatics knowledge; retracted recognition ... See more keywords
Peptidoglycan recognition protein PGRP-5 is involved in immune defence and neuro-behavioral disorders in zebrafish embryos
Sign Up to like & getrecommendations! Published in 2025 at "PLOS ONE"
DOI: 10.1371/journal.pone.0315714
Abstract: Peptidoglycan recognition proteins (PGRPs) are the evolutionarily highly conserved class of pattern recognition receptors, however, their functions on the innate immune system and neuro-inflammatory response in aquatic organism are still poorly understood. In this study,… read more here.
Keywords: recognition protein; recognition; pgrp involved; peptidoglycan recognition ... See more keywords
Molecular and Functional Characterization of a Short-Type Peptidoglycan Recognition Protein, Ct-PGRP-S1 in the Giant Triton Snail Charonia tritonis
Sign Up to like & getrecommendations! Published in 2022 at "International Journal of Molecular Sciences"
DOI: 10.3390/ijms231911062
Abstract: Peptidoglycan recognition proteins (PGRPs) are a family of pattern recognition receptors (PRRs) involved in host antibacterial responses, and their functions have been characterized in most invertebrate and vertebrate animals. However, little information is available regarding… read more here.
Keywords: recognition; recognition protein; peptidoglycan recognition; pgrp ... See more keywords