A forest is more than its trees: haplotypes and ancestral recombination graphs.
Sign Up to like & getrecommendations! Published in 2025 at "Genetics"
DOI: 10.1093/genetics/iyaf198
Abstract: Abstract Foreshadowing haplotype-based methods of the genomics era, it is an old observation that the “junction” between two distinct haplotypes produced by recombination is inherited as a Mendelian marker. In a genealogical context, this recombination-mediated… read more here.
Keywords: recombination; forest trees; recombination graphs; trees haplotypes ... See more keywords
Bayesian inference of ancestral recombination graphs
Sign Up to like & getrecommendations! Published in 2022 at "PLoS Computational Biology"
DOI: 10.1371/journal.pcbi.1009960
Abstract: We present a novel algorithm, implemented in the software ARGinfer, for probabilistic inference of the Ancestral Recombination Graph under the Coalescent with Recombination. Our Markov Chain Monte Carlo algorithm takes advantage of the Succinct Tree… read more here.
Keywords: inference; recombination; recombination graphs; bayesian inference ... See more keywords