Population-Specific Recombination Maps from Segments of Identity by Descent.
Sign Up to like & getrecommendations! Published in 2020 at "American journal of human genetics"
DOI: 10.1016/j.ajhg.2020.05.016
Abstract: Recombination rates vary significantly across the genome, and estimates of recombination rates are needed for downstream analyses such as haplotype phasing and genotype imputation. Existing methods for recombination rate estimation are limited by insufficient amounts… read more here.
Keywords: recombination rates; identity descent; population; segments identity ... See more keywords
Inferring bacterial recombination rates from large-scale sequencing datasets
Sign Up to like & getrecommendations! Published in 2019 at "Nature Methods"
DOI: 10.1038/s41592-018-0293-7
Abstract: We present a robust, computationally efficient method (https://github.com/kussell-lab/mcorr) for inferring the parameters of homologous recombination in bacteria, which can be applied in diverse datasets, from whole-genome sequencing to metagenomic shotgun sequencing data. Using correlation profiles… read more here.
Keywords: recombination parameters; gene pool; recombination rates; recombination ... See more keywords
Extreme differences in recombination rate between the genomes of a solitary and a social bee.
Sign Up to like & getrecommendations! Published in 2019 at "Molecular biology and evolution"
DOI: 10.1093/molbev/msz130
Abstract: Social insect genomes exhibit the highest rates of crossing over observed in plants and animals. The evolutionary causes of these extreme rates are unknown. Insight can be gained by comparing recombination rate variation across the… read more here.
Keywords: insects; recombination rates; bee; recombination ... See more keywords
Variation in Recombination Rate Is Shaped by Domestication and Environmental Conditions in Barley
Sign Up to like & getrecommendations! Published in 2019 at "Molecular Biology and Evolution"
DOI: 10.1093/molbev/msz141
Abstract: Abstract Meiotic recombination generates genetic diversity upon which selection can act. Recombination rates are highly variable between species, populations, individuals, sexes, chromosomes, and chromosomal regions. The underlying mechanisms are controlled at the genetic and epigenetic… read more here.
Keywords: environmental conditions; recombination rates; wild barley; recombination ... See more keywords
Correlated substitutions reveal SARS-like coronaviruses recombine frequently with a diverse set of structured gene pools
Sign Up to like & getrecommendations! Published in 2022 at "Proceedings of the National Academy of Sciences of the United States of America"
DOI: 10.1101/2022.08.26.505425
Abstract: Quantifying SARS-like coronavirus (SL-CoV) evolution is critical to understanding the origins of SARS-CoV-2 and the molecular processes that could underlie future epidemic viruses. While genomic evidence implicates recombination as a factor in the emergence of… read more here.
Keywords: sars like; recombination; recombination rates; gene pools ... See more keywords
Statistical dielectronic recombination rates for multielectron ions in plasma
Sign Up to like & getrecommendations! Published in 2017 at "Journal of Experimental and Theoretical Physics"
DOI: 10.1134/s1063776117090138
Abstract: We describe the general analytic derivation of the dielectronic recombination (DR) rate coefficient for multielectron ions in a plasma based on the statistical theory of an atom in terms of the spatial distribution of the… read more here.
Keywords: dielectronic recombination; recombination rates; statistical dielectronic; ions plasma ... See more keywords
Recombination mapping of the Brazilian stingless bee Frieseomelitta varia confirms high recombination rates in social hymenoptera
Sign Up to like & getrecommendations! Published in 2021 at "BMC Genomics"
DOI: 10.1186/s12864-021-07987-3
Abstract: Background Meiotic recombination is a fundamental genetic process that shuffles allele combinations and promotes accurate segregation of chromosomes. Analyses of the ubiquitous variation of recombination rates within and across species suggest that recombination is evolving… read more here.
Keywords: hymenoptera; insects; high recombination; recombination rates ... See more keywords
A large accessory genome and high recombination rates may influence global distribution and broad host range of the fungal plant pathogen Claviceps purpurea
Sign Up to like & getrecommendations! Published in 2022 at "PLoS ONE"
DOI: 10.1371/journal.pone.0263496
Abstract: Pangenome analyses are increasingly being utilized to study the evolution of eukaryotic organisms. While pangenomes can provide insight into polymorphic gene content, inferences about the ecological and adaptive potential of such organisms also need to… read more here.
Keywords: recombination; large accessory; claviceps purpurea; recombination rates ... See more keywords