Reference‐free discovery of nuclear SNPs permits accurate, sensitive identification of Carya (hickory) species and hybrids
Sign Up to like & getrecommendations! Published in 2022 at "Applications in Plant Sciences"
DOI: 10.1002/aps3.11455
Abstract: Abstract Premise DNA‐based species identification is critical when morphological identification is restricted, but DNA‐based identification pipelines typically rely on the ability to compare homologous sequence data across species. Because many clades lack robust genomic resources,… read more here.
Keywords: identification; free discovery; snps; discovery nuclear ... See more keywords
Reference-free digital shadowgraphy using a moving BOS background
Sign Up to like & getrecommendations! Published in 2020 at "Experiments in Fluids"
DOI: 10.1007/s00348-019-2865-4
Abstract: Abstract A method of measuring density second derivative (shadowgraph) as a variant of background oriented schlieren (BOS) is presented. Pairs of images of a moving background with a small time difference are analysed using moving-window… read more here.
Keywords: bos; using moving; method; correlation ... See more keywords
Common lines modeling for reference free Ab-initio reconstruction in cryo-EM.
Sign Up to like & getrecommendations! Published in 2017 at "Journal of structural biology"
DOI: 10.1016/j.jsb.2017.09.007
Abstract: We consider the problem of estimating an unbiased and reference-free ab initio model for non-symmetric molecules from images generated by single-particle cryo-electron microscopy. The proposed algorithm finds the globally optimal assignment of orientations that simultaneously… read more here.
Keywords: reference free; model; free initio; common lines ... See more keywords
Reference-free NOE NMR analysis†
Sign Up to like & getrecommendations! Published in 2020 at "Chemical Science"
DOI: 10.1039/d0sc02970j
Abstract: Nuclear Overhauser Effect (NOE) methods in NMR are an important tool for 3D structural analysis of small molecules. Quantitative NOE methods conventionally rely on reference distances, known distances that have to be spectrally separated and… read more here.
Keywords: noe nmr; free noe; analysis; reference ... See more keywords
CURC: a CUDA-based reference-free read compressor
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac333
Abstract: MOTIVATION The data deluge of high-throughput sequencing has posed great challenges to data storage and transfer. Many specific compression tools have been developed to solve this problem. However, most of the existing compressors are based… read more here.
Keywords: read compressor; free read; reference free; curc ... See more keywords
Crumble: reference free lossy compression of sequence quality values
Sign Up to like & getrecommendations! Published in 2019 at "Bioinformatics"
DOI: 10.1093/bioinformatics/bty608
Abstract: Motivation: The bulk of space taken up by NGS sequencing CRAM files consists of per‐base quality values. Most of these are unnecessary for variant calling, offering an opportunity for space saving. Results: On the Syndip… read more here.
Keywords: quality; quality values; free lossy; lossy compression ... See more keywords
Reference-Free Material Characterisation of Objects Based on Terahertz Ellipsometry
Sign Up to like & getrecommendations! Published in 2020 at "IEEE Access"
DOI: 10.1109/access.2020.3029355
Abstract: Material characterization in the 0.1 – 10 THz range has been a major topic of research since its first demonstration 30 years ago. Advances in terahertz generation, detection, and data acquisition have contributed to improved… read more here.
Keywords: ellipsometry; material characterization; reference; reference free ... See more keywords
Implicit Cross-Lingual Word Embedding Alignment for Reference-Free Machine Translation Evaluation
Sign Up to like & getrecommendations! Published in 2023 at "IEEE Access"
DOI: 10.1109/access.2023.3260835
Abstract: As we know, cross-lingual word embedding alignment is critically important for reference-free machine translation evaluation, where source texts are directly compared with system translations. In this paper, it is revealed that multilingual knowledge distillation for… read more here.
Keywords: lingual word; word embedding; word; reference free ... See more keywords
Reference-Free DIBR-Synthesized Video Quality Metric in Spatial and Temporal Domains
Sign Up to like & getrecommendations! Published in 2022 at "IEEE Transactions on Circuits and Systems for Video Technology"
DOI: 10.1109/tcsvt.2021.3074181
Abstract: Depth image-based rendering (DIBR) techniques play an important role in free viewpoint videos (FVVs), which have a wide range of applications including immersive entertainment, remote monitoring, education, etc. FVVs are usually synthesized by DIBR techniques… read more here.
Keywords: synthesized video; quality; reference free; dibr synthesized ... See more keywords
A Reference-Free Calibration for Ultrafast Spatiotemporally Encoded 2-D NMR Spectroscopy
Sign Up to like & getrecommendations! Published in 2023 at "IEEE Transactions on Instrumentation and Measurement"
DOI: 10.1109/tim.2023.3234082
Abstract: Spatiotemporal encoding (SPEN) is a state-of-the-art nuclear magnetic resonance (NMR) technique, utilized to acquire 2-D or even multidimensional ( $n$ -D) NMR spectra and/or images in a single (or a few) scans. Benefitting from special… read more here.
Keywords: free calibration; reference; spectroscopy; reference free ... See more keywords
Golden Reference-Free Hardware Trojan Localization Using Graph Convolutional Network
Sign Up to like & getrecommendations! Published in 2022 at "IEEE Transactions on Very Large Scale Integration (VLSI) Systems"
DOI: 10.1109/tvlsi.2022.3191683
Abstract: The globalization of the integrated circuit (IC) supply chain has moved most of the design, fabrication, and testing process from a single trusted entity to various untrusted third-party entities worldwide. The risk of using untrusted… read more here.
Keywords: graph convolutional; localization; golden reference; reference free ... See more keywords