Articles with "reference free" as a keyword



Reference‐free discovery of nuclear SNPs permits accurate, sensitive identification of Carya (hickory) species and hybrids

Sign Up to like & get
recommendations!
Published in 2022 at "Applications in Plant Sciences"

DOI: 10.1002/aps3.11455

Abstract: Abstract Premise DNA‐based species identification is critical when morphological identification is restricted, but DNA‐based identification pipelines typically rely on the ability to compare homologous sequence data across species. Because many clades lack robust genomic resources,… read more here.

Keywords: identification; free discovery; snps; discovery nuclear ... See more keywords

Reference-free digital shadowgraphy using a moving BOS background

Sign Up to like & get
recommendations!
Published in 2020 at "Experiments in Fluids"

DOI: 10.1007/s00348-019-2865-4

Abstract: Abstract A method of measuring density second derivative (shadowgraph) as a variant of background oriented schlieren (BOS) is presented. Pairs of images of a moving background with a small time difference are analysed using moving-window… read more here.

Keywords: bos; using moving; method; correlation ... See more keywords

Common lines modeling for reference free Ab-initio reconstruction in cryo-EM.

Sign Up to like & get
recommendations!
Published in 2017 at "Journal of structural biology"

DOI: 10.1016/j.jsb.2017.09.007

Abstract: We consider the problem of estimating an unbiased and reference-free ab initio model for non-symmetric molecules from images generated by single-particle cryo-electron microscopy. The proposed algorithm finds the globally optimal assignment of orientations that simultaneously… read more here.

Keywords: reference free; model; free initio; common lines ... See more keywords
Photo by vlisidis from unsplash

Reference-free NOE NMR analysis†

Sign Up to like & get
recommendations!
Published in 2020 at "Chemical Science"

DOI: 10.1039/d0sc02970j

Abstract: Nuclear Overhauser Effect (NOE) methods in NMR are an important tool for 3D structural analysis of small molecules. Quantitative NOE methods conventionally rely on reference distances, known distances that have to be spectrally separated and… read more here.

Keywords: noe nmr; free noe; analysis; reference ... See more keywords

Systematic critical review of structural health monitoring under environmental and operational variability: approaches for baseline compensation, adaptation, and reference-free techniques

Sign Up to like & get
recommendations!
Published in 2025 at "Smart Materials and Structures"

DOI: 10.1088/1361-665x/ade7db

Abstract: Structural health monitoring (SHM) plays a pivotal role in ensuring the safety, reliability and service life of engineering structures. In smart structures, networks of active-response materials (e.g. piezoelectric films, magnetostrictive patches, or fibre-optic cables), which… read more here.

Keywords: environmental operational; reference free; baseline compensation; health monitoring ... See more keywords

A lossless reference-free sequence compression algorithm leveraging grammatical, statistical, and substitution rules

Sign Up to like & get
recommendations!
Published in 2025 at "Briefings in Functional Genomics"

DOI: 10.1093/bfgp/elae050

Abstract: Abstract Deoxyribonucleic acid (DNA) or ribonucleic acid (RNA) sequence compressors for novel species frequently face challenges when processing wide-scale raw, FASTA, or multi-FASTA structured data. For years, molecular sequence databases have favored the widely used… read more here.

Keywords: reference free; rna; sequence; compression ... See more keywords

CURC: a CUDA-based reference-free read compressor

Sign Up to like & get
recommendations!
Published in 2022 at "Bioinformatics"

DOI: 10.1093/bioinformatics/btac333

Abstract: MOTIVATION The data deluge of high-throughput sequencing has posed great challenges to data storage and transfer. Many specific compression tools have been developed to solve this problem. However, most of the existing compressors are based… read more here.

Keywords: read compressor; free read; reference free; curc ... See more keywords
Photo by bermixstudio from unsplash

Crumble: reference free lossy compression of sequence quality values

Sign Up to like & get
recommendations!
Published in 2019 at "Bioinformatics"

DOI: 10.1093/bioinformatics/bty608

Abstract: Motivation: The bulk of space taken up by NGS sequencing CRAM files consists of per‐base quality values. Most of these are unnecessary for variant calling, offering an opportunity for space saving. Results: On the Syndip… read more here.

Keywords: quality; quality values; free lossy; lossy compression ... See more keywords

Reference-Free Material Characterisation of Objects Based on Terahertz Ellipsometry

Sign Up to like & get
recommendations!
Published in 2020 at "IEEE Access"

DOI: 10.1109/access.2020.3029355

Abstract: Material characterization in the 0.1 – 10 THz range has been a major topic of research since its first demonstration 30 years ago. Advances in terahertz generation, detection, and data acquisition have contributed to improved… read more here.

Keywords: ellipsometry; material characterization; reference; reference free ... See more keywords

Implicit Cross-Lingual Word Embedding Alignment for Reference-Free Machine Translation Evaluation

Sign Up to like & get
recommendations!
Published in 2023 at "IEEE Access"

DOI: 10.1109/access.2023.3260835

Abstract: As we know, cross-lingual word embedding alignment is critically important for reference-free machine translation evaluation, where source texts are directly compared with system translations. In this paper, it is revealed that multilingual knowledge distillation for… read more here.

Keywords: lingual word; word embedding; word; reference free ... See more keywords

Reference-Free Fault Diagnosis and Corrected Field Prediction in a Planar Antenna Array

Sign Up to like & get
recommendations!
Published in 2024 at "IEEE Antennas and Wireless Propagation Letters"

DOI: 10.1109/lawp.2023.3335464

Abstract: Most existing fault diagnosis methods in antenna arrays assume that a reference pattern of a fault-free array (healthy array) is available for fault detection. A reference-free diagnosis method is a topic of great practical interest… read more here.

Keywords: reference; reference free; array; fault diagnosis ... See more keywords