Reference-guided deep deblurring via a selective attention network
Sign Up to like & getrecommendations! Published in 2021 at "Applied Intelligence"
DOI: 10.1007/s10489-021-02585-y
Abstract: Image deblurring is an important problem encountered in many image restoration tasks. To remove the motion blur of images captured from dynamic scenes, various Convolutional Neural Networks (CNNs) based methods are developed to restore the… read more here.
Keywords: selective attention; image; guided deep; reference ... See more keywords
Reference-guided metagenomics reveals genome-level evidence of potential microbial transmission from the ISS environment to an astronaut's microbiome
Sign Up to like & getrecommendations! Published in 2021 at "iScience"
DOI: 10.1016/j.isci.2021.102114
Abstract: Summary Monitoring microbial communities aboard the International Space Station (ISS) is essential to maintaining astronaut health and the integrity of life-support systems. Using assembled genomes of ISS-derived microbial isolates as references, recruiting metagenomic reads from… read more here.
Keywords: genome level; level evidence; reveals genome; reference guided ... See more keywords
Incorporating reference guided priors into calibrationless parallel imaging reconstruction.
Sign Up to like & getrecommendations! Published in 2019 at "Magnetic resonance imaging"
DOI: 10.1016/j.mri.2018.12.006
Abstract: PURPOSE To propose and evaluate a new calibrationless parallel imaging method aimed at further improving the reconstruction accuracy of the accelerated multi-channel MR images. METHOD We introduce a new calibrationless parallel imaging method. On top… read more here.
Keywords: reconstruction; reference guided; calibrationless parallel; parallel imaging ... See more keywords
RA3 is a reference-guided approach for epigenetic characterization of single cells
Sign Up to like & getrecommendations! Published in 2021 at "Nature Communications"
DOI: 10.1038/s41467-021-22495-4
Abstract: The recent advancements in single-cell technologies, including single-cell chromatin accessibility sequencing (scCAS), have enabled profiling the epigenetic landscapes for thousands of individual cells. However, the characteristics of scCAS data, including high dimensionality, high degree of… read more here.
Keywords: ra3 reference; sccas data; reference; reference guided ... See more keywords
Reference-Guided Landmark Image Inpainting With Deep Feature Matching
Sign Up to like & getrecommendations! Published in 2022 at "IEEE Transactions on Circuits and Systems for Video Technology"
DOI: 10.1109/tcsvt.2022.3193893
Abstract: Despite impressive progress made by recent image inpainting methods, they often fail to predict the original content when the corrupted region contains unique structures, especially for landmark images. Applying similar images as a reference is… read more here.
Keywords: reference guided; image inpainting; reference; guided landmark ... See more keywords
RaGOO: fast and accurate reference-guided scaffolding of draft genomes
Sign Up to like & getrecommendations! Published in 2019 at "Genome Biology"
DOI: 10.1186/s13059-019-1829-6
Abstract: We present RaGOO, a reference-guided contig ordering and orienting tool that leverages the speed and sensitivity of Minimap2 to accurately achieve chromosome-scale assemblies in minutes. After the pseudomolecules are constructed, RaGOO identifies structural variants, including… read more here.
Keywords: guided scaffolding; fast accurate; reference; accurate reference ... See more keywords
A hybrid reference-guided de novo assembly approach for generating Cyclospora mitochondrion genomes
Sign Up to like & getrecommendations! Published in 2018 at "Gut Pathogens"
DOI: 10.1186/s13099-018-0242-0
Abstract: Cyclospora cayetanensis is a coccidian parasite associated with large and complex foodborne outbreaks worldwide. Linking samples from cyclosporiasis patients during foodborne outbreaks with suspected contaminated food sources, using conventional epidemiological methods, has been a persistent… read more here.
Keywords: guided novo; novo assembly; mitochondrion genomes; reference ... See more keywords