Genetic diversity of Phytophthora palmivora isolates from Indonesia and Japan using rep-PCR and microsatellite markers
Sign Up to like & getrecommendations! Published in 2019 at "Journal of General Plant Pathology"
DOI: 10.1007/s10327-019-00853-x
Abstract: Phytophthora palmivora infects hundreds of plant species around the world. Determining the genetic diversity among isolates is necessary to establish more effective control strategies, manage resistance and understand epidemiology, long-term evolution of the pathogen, host–pathogen… read more here.
Keywords: genetic diversity; indonesia japan; rep pcr; microsatellite markers ... See more keywords
Genetic diversity of potato blackleg pathogens, Pectobacterium wasabiae, P. carotovorum subsp. brasiliense and Dickeya dianthicola in Japan by rep-PCR fingerprinting
Sign Up to like & getrecommendations! Published in 2021 at "European Journal of Plant Pathology"
DOI: 10.1007/s10658-021-02216-9
Abstract: We determined the species composition of 219 isolates of potato blackleg or soft rot pathogens in Japan collected after 2000 from potato plants by species-specific PCR. Of the total, Pectobacterium wasabiae (Pw) and P. carotovorum… read more here.
Keywords: genetic diversity; rep pcr; potato; blackleg ... See more keywords
Gamma irradiation induces genetic variation and boosting antagonism in Trichoderma aureoviride
Sign Up to like & getrecommendations! Published in 2021 at "Archives of Phytopathology and Plant Protection"
DOI: 10.1080/03235408.2021.1936377
Abstract: Abstract This study was carried out to assess in vitro biocontrol efficacy of the Trichoderma aureoviride gamma-induced mutants against three soilborne phytopathogens (Fusarium graminearum, Sclerotinia sclerotiorum and Rhizoctonia solani), and apply rep-PCR analysis for resolving… read more here.
Keywords: aureoviride gamma; wild type; gamma irradiation; irradiation induces ... See more keywords
Comparison of semi‐automated commercial rep‐PCR fingerprinting, spoligotyping, 12‐locus MIRU‐VNTR typing and single nucleotide polymorphism analysis of the embB gene as molecular typing tools for Mycobacterium bovis
Sign Up to like & getrecommendations! Published in 2017 at "Journal of Medical Microbiology"
DOI: 10.1099/jmm.0.000536
Abstract: Purpose. Highly discriminatory genotyping strategies are essential in molecular epidemiological studies of tuberculosis. In this study we evaluated, for the first time, the efficacy of the repetitive sequence‐based PCR (rep‐PCR) DiversiLab Mycobacterium typing kit over… read more here.
Keywords: pcr; miru vntr; rep pcr;
Characterization of Staphylococcus aureus isolates from pastry samples by rep-PCR and phage typing
Sign Up to like & getrecommendations! Published in 2022 at "Iranian Journal of Microbiology"
DOI: 10.18502/ijm.v14i1.8806
Abstract: Background and Objectives: Staphylococcus aureus is one of the most common causes of food poisoning. This study aimed to identify S. aureus isolated from pastries, the virulence factors, antimicrobial resistance patterns, biofilm formation, and then… read more here.
Keywords: rep pcr; aureus; aureus isolates; pastry samples ... See more keywords
A novel repeat sequence-based PCR (rep-PCR) using specific repeat sequences of Mycobacterium intracellulare as a DNA fingerprinting
Sign Up to like & getrecommendations! Published in 2023 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2023.1161194
Abstract: Repetitive sequence-based PCR (rep-PCR) is a potential epidemiological technique that can provide high-throughput genotype fingerprints of heterogeneous Mycobacterium strains rapidly. Previously published rep-PCR primers, which are based on nucleotide sequences of Gram-negative bacteria may have… read more here.
Keywords: rep pcr; rep; intracellulare; repeat ... See more keywords
Investigation of Genetic Similarities of the Isolated Pseudomonas Aeruginosa from Hospitals and their Surrounding Areas by Rep-PCR Method.
Sign Up to like & getrecommendations! Published in 2023 at "Clinical laboratory"
DOI: 10.7754/clin.lab.2022.220358
Abstract: BACKGROUND Pseudomonas (P.) aeruginosa is one of the most common causes of nosocomial infections. The aim of this study was to explore the antibiotic resistance pattern and genetic association of P. aeruginosa strains isolated from… read more here.
Keywords: rep pcr; hospitals surrounding; pseudomonas aeruginosa; genetic similarities ... See more keywords