Rearrangement of incomplete multi-omics datasets combined with ComDim for evaluating replicate cross-platform variability and batch influence
Sign Up to like & getrecommendations! Published in 2021 at "Chemometrics and Intelligent Laboratory Systems"
DOI: 10.1016/j.chemolab.2021.104422
Abstract: Abstract Multi-omics studies can highlight the interrelationships among data across different layers of biological information. However, methods for the unsupervised analysis of multi-block data do not take the individual variability across batches into account and… read more here.
Keywords: multi; multi omics; block; replicate ... See more keywords
Can demand-side management replicate a size limit in a small-scale fishery?
Sign Up to like & getrecommendations! Published in 2020 at "Fisheries Research"
DOI: 10.1016/j.fishres.2019.105436
Abstract: We tested whether it is possible to replicate the effects of a size limit with a voluntary mechanism – a price premium for larger fish. We randomly offered fishers in Indonesia a bonus for catching… read more here.
Keywords: size; size limit; replicate; price premium ... See more keywords
PeptideMind - Applying machine learning algorithms to assess replicate quality in shotgun proteomic data
Sign Up to like & getrecommendations! Published in 2021 at "SoftwareX"
DOI: 10.1016/j.softx.2020.100644
Abstract: Abstract Assessment of replicate quality is an important process for any shotgun proteomics experiment. One fundamental question in proteomics data analysis is whether any specific replicates in a set of analyses are biasing the downstream… read more here.
Keywords: quality; replicate quality; machine learning; algorithms assess ... See more keywords
Replacing dietary antibiotics with 0.20% l-glutamine in swine nursery diets: impact on health and productivity of pigs following weaning and transport1,2,3.
Sign Up to like & getrecommendations! Published in 2019 at "Journal of animal science"
DOI: 10.1093/jas/skz098
Abstract: Antibiotic use has been limited in U.S. swine production. Therefore, the objective was to determine whether supplementing l-glutamine at cost-effective levels can replace dietary antibiotics to improve piglet welfare and productivity following weaning and transport.… read more here.
Keywords: dietary antibiotics; productivity; replicate; following weaning ... See more keywords
Are post-error adjustments influenced by beliefs in free will? A failure to replicate Rigoni, Wilquin, Brass and Burle, 2013
Sign Up to like & getrecommendations! Published in 2020 at "Royal Society Open Science"
DOI: 10.1098/rsos.200664
Abstract: In this pre-registered study, we tried to replicate the study by Rigoni et al. 2013 Cognition 127, 264–269. In the original study, the authors manipulated the participants’ belief in free will in a between-subject design… read more here.
Keywords: post error; replicate; study; belief free ... See more keywords
Evaluation of a panel of tumor-specific differentially-methylated DNA regions in IRF4, IKZF1 and BCAT1 for blood-based detection of colorectal cancer
Sign Up to like & getrecommendations! Published in 2021 at "Clinical Epigenetics"
DOI: 10.1186/s13148-020-00999-y
Abstract: Background Differentially-methylated regions (DMRs) are characteristic of colorectal cancer (CRC) and some occur more frequently than common mutations. This study aimed to evaluate the clinical utility of assaying circulating cell-free DNA for methylation in BCAT1,… read more here.
Keywords: detection; bcat1; replicate; differentially methylated ... See more keywords
Investigating variability in microbial community composition in replicate environmental DNA samples down lake sediment cores
Sign Up to like & getrecommendations! Published in 2021 at "PLoS ONE"
DOI: 10.1371/journal.pone.0250783
Abstract: Lake sediments are natural archives that accumulate information on biological communities and their surrounding catchments. Paleolimnology has traditionally focussed on identifying fossilized organisms to reconstruct past environments. In the last decade, the application of molecular… read more here.
Keywords: dna; sediment cores; community; replicate ... See more keywords