Characterization of porcine simple sequence repeat variation on a population scale with genome resequencing data
Sign Up to like & getrecommendations! Published in 2017 at "Scientific Reports"
DOI: 10.1038/s41598-017-02600-8
Abstract: Simple sequence repeats (SSRs) are used as polymorphic molecular markers in many species. They contribute very important functional variations in a range of complex traits; however, little is known about the variation of most SSRs… read more here.
Keywords: variation; ssrs; simple sequence; genome resequencing ... See more keywords
pyAmpli: an amplicon-based variant filter pipeline for targeted resequencing data
Sign Up to like & getrecommendations! Published in 2017 at "BMC Bioinformatics"
DOI: 10.1186/s12859-017-1985-1
Abstract: BackgroundHaloplex targeted resequencing is a popular method to analyze both germline and somatic variants in gene panels. However, involved wet-lab procedures may introduce false positives that need to be considered in subsequent data-analysis. No variant… read more here.
Keywords: targeted resequencing; pyampli amplicon; amplicon based; data pyampli ... See more keywords
Whole genome resequencing data sets of different species from Pistacia genus
Sign Up to like & getrecommendations! Published in 2021 at "BMC Research Notes"
DOI: 10.1186/s13104-021-05702-9
Abstract: Objectives Pistacia genus belongs to the flowering plants in the cashew family and contains at least 11 species. The whole-genome resequencing data of different species from Pistacia genus are described herein. The data reported here… read more here.
Keywords: whole genome; different species; genome resequencing; species pistacia ... See more keywords