HDIContact: a novel predictor of residue-residue contacts on hetero-dimer interfaces via sequential information and transfer learning strategy
Sign Up to like & getrecommendations! Published in 2022 at "Briefings in bioinformatics"
DOI: 10.1093/bib/bbac169
Abstract: Proteins maintain the functional order of cell in life by interacting with other proteins. Determination of protein complex structural information gives biological insights for the research of diseases and drugs. Recently, a breakthrough has been… read more here.
Keywords: information; residue contacts; contacts hetero; hdicontact ... See more keywords
ReFOLD3: refinement of 3D protein models with gradual restraints based on predicted local quality and residue contacts
Sign Up to like & getrecommendations! Published in 2021 at "Nucleic Acids Research"
DOI: 10.1093/nar/gkab300
Abstract: Abstract ReFOLD3 is unique in its application of gradual restraints, calculated from local model quality estimates and contact predictions, which are used to guide the refinement of theoretical 3D protein models towards the native structures.… read more here.
Keywords: residue contacts; quality; protein models; gradual restraints ... See more keywords
Protein Inter-Residue Contacts Prediction: Methods, Performances and Applications
Sign Up to like & getrecommendations! Published in 2019 at "Current Bioinformatics"
DOI: 10.2174/1574893613666181109130430
Abstract: Protein inter-residue contacts prediction play an important role in the field of protein structure and function research. As a low-dimensional representation of protein tertiary structure, protein inter-residue contacts could greatly help de novo protein structure… read more here.
Keywords: inter residue; residue contacts; protein inter; contacts prediction ... See more keywords