A haplotype-resolved genome provides insight into allele-specific expression in wild walnut (Juglans regia L.)
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DOI: 10.1038/s41597-024-03096-4
Abstract: Wild germplasm resources are crucial for gene mining and molecular breeding because of their special trait performance. Haplotype-resolved genome is an ideal solution for fully understanding the biology of subgenomes in highly heterozygous species. Here,… read more here.
Keywords: wild walnut; resolved genome; haplotype; allele specific ... See more keywords
A haplotype-resolved genome assembly of Malus domestica ‘Red Fuji’
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DOI: 10.1038/s41597-024-03401-1
Abstract: The ‘Red Fuji’ apple (Malus domestica), is one of the most important and popular economic crops worldwide in the fruit industry. Using PacBio HiFi long reads and Hi-C reads, we assembled a high-quality haplotype-resolved genome… read more here.
Keywords: resolved genome; red fuji; fuji; malus domestica ... See more keywords
An annotated haplotype-resolved genome sequence assembly of diploid German chamomile, Matricaria chamomilla
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DOI: 10.1038/s41597-025-04688-4
Abstract: Matricaria chamomilla L. (chamomile) is a medicinal plant that is widely used for treating skin infections and respiratory ailments. Chamomile belongs to the Asteraceae family of flowering plants and is a primarily outcrossing species with… read more here.
Keywords: resolved genome; matricaria chamomilla; haplotype; chamomile ... See more keywords
A haplotype-resolved genome assembly of Anoectochilus roxburghii
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DOI: 10.1038/s41597-025-06181-4
Abstract: Anoectochilus roxburghii, a highly valued medicinal plant in traditional Chinese medicine, exhibits unique pharmacological properties and broad application value. In this study, we de novo assembled and annotated haplotype-resolved chromosome-level genomes of A. roxburghii cultivar… read more here.
Keywords: anoectochilus roxburghii; resolved genome; assembly; haplotype resolved ... See more keywords
Chromosome-scale and haplotype-resolved genome assembly of Populus trichocarpa
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DOI: 10.1093/hr/uhaf012
Abstract: Abstract Populus trichocarpa, a pivotal model organism for woody transgenic research, not only garners substantial scientific interest but plays an integral role in forestry economics. Previous genomic assemblies of P. trichocarpa predominantly treated its heterozygous… read more here.
Keywords: scale haplotype; resolved genome; chromosome scale; populus trichocarpa ... See more keywords
Chromosome-Scale, Haplotype-Resolved Genome Assembly of Suaeda Glauca
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DOI: 10.3389/fgene.2022.884081
Abstract: Agricultural College, Inner Mongolia Agricultural University, Hohhot, China, College of Grassland, Resources and Environment, Inner Mongolia Agricultural University, Hohhot, China, School of Pharmaceutical Sciences, Baotou Medical College, Baotou, China, Inner Mongolia Academy of Agricultural &… read more here.
Keywords: resolved genome; hohhot china; inner mongolia; scale haplotype ... See more keywords