Insights into the phylogeny of the ciliate of class Colpodea based on multigene data
Sign Up to like & getrecommendations! Published in 2022 at "Ecology and Evolution"
DOI: 10.1002/ece3.9380
Abstract: Abstract In the class Colpodea, there are many unresolved evolutionary relationships among taxa. Here, we report 30 new sequences including SSU‐rRNA, ITS1‐5.8S‐ ITS2 rRNA, and the mitochondrial small subunit ribosomal RNA (mtSSU‐rRNA) genes of five… read more here.
Keywords: insights phylogeny; phylogeny ciliate; class; class colpodea ... See more keywords
In Vivo Production of Small Recombinant RNAs Embedded in 5S rRNA-Derived Protective Scaffold.
Sign Up to like & getrecommendations! Published in 2021 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-1499-0_7
Abstract: Preparative synthesis of RNA is a challenging task that is usually accomplished by either chemical or enzymatic polymerization of ribonucleotides in vitro. Herein, we describe an alternative approach in which RNAs of interest are expressed… read more here.
Keywords: rrna; scaffold; vivo production; rnas ... See more keywords
Dynamic changes in histone modification are associated with upregulation of Hsf and rRNA genes during heat stress in maize seedlings
Sign Up to like & getrecommendations! Published in 2019 at "Protoplasma"
DOI: 10.1007/s00709-019-01364-4
Abstract: Histone modification plays a significant role in plant responses to abiotic stress. However, there are little scientific studies available on the involvement of dynamic changes in histone modification in the heat stress response in maize.… read more here.
Keywords: histone modification; rrna; maize seedlings; heat stress ... See more keywords
A novel insight in favor of structure–function relationship for 16S rRNA
Sign Up to like & getrecommendations! Published in 2018 at "Molecular Biology Reports"
DOI: 10.1007/s11033-018-4274-9
Abstract: Sequences in the stem-loop part of 16S ribosomal RNA (rRNA) are considered to be crucial for predicting antibiotic resistance. Mutant sequences have been reported to be helpful in the prediction of spectinomycin resistance. It is… read more here.
Keywords: rrna; novel insight; 16s rrna; stem loop ... See more keywords
RNA Polymerase 1 Is Transiently Regulated by Seizures and Plays a Role in a Pharmacological Kindling Model of Epilepsy
Sign Up to like & getrecommendations! Published in 2018 at "Molecular Neurobiology"
DOI: 10.1007/s12035-018-0989-9
Abstract: Ribosome biogenesis, including the RNA polymerase 1 (Pol1)-mediated transcription of rRNA, is regulated by the pro-epileptogenic mTOR pathway. Therefore, hippocampal Pol1 activity was examined in mouse models of epilepsy including kainic acid- and pilocarpine-induced status… read more here.
Keywords: ribosome content; rna polymerase; pol1; rrna ... See more keywords
Tetracyclines Modify Translation by Targeting Key Human rRNA Substructures.
Sign Up to like & getrecommendations! Published in 2018 at "Cell chemical biology"
DOI: 10.1016/j.chembiol.2018.09.010
Abstract: Apart from their antimicrobial properties, tetracyclines demonstrate clinically validated effects in the amelioration of pathological inflammation and human cancer. Delineation of the target(s) and mechanism(s) responsible for these effects, however, has remained elusive. Here, employing… read more here.
Keywords: human rrna; rrna; tetracyclines modify; key human ... See more keywords
Analysis of ribosomal RNA stability in dead cells of wine yeast by quantitative PCR.
Sign Up to like & getrecommendations! Published in 2018 at "International journal of food microbiology"
DOI: 10.1016/j.ijfoodmicro.2018.01.020
Abstract: During wine production, some yeasts enter a Viable But Not Culturable (VBNC) state, which may influence the quality and stability of the final wine through remnant metabolic activity or by resuscitation. Culture-independent techniques are used… read more here.
Keywords: quantitative pcr; rrna; dead cells; stability ... See more keywords
Transcription of ribogenesis genes in fish gonads: Applications in the identification of stages of oogenesis and in environmental monitoring of intersex condition.
Sign Up to like & getrecommendations! Published in 2017 at "Marine pollution bulletin"
DOI: 10.1016/j.marpolbul.2017.06.027
Abstract: One of the best described effects of environmental xenoestrogens in fish is the generation of intersex gonads in males. Considering 5S rRNA a marker of the presence of oocytes, a 5S/18S rRNA index was calculated… read more here.
Keywords: 18s rrna; transcription; rrna; ribogenesis genes ... See more keywords
Nascent Pre-rRNA Sorting via Phase Separation Drives the Assembly of Dense Fibrillar Components in the Human Nucleolus.
Sign Up to like & getrecommendations! Published in 2019 at "Molecular cell"
DOI: 10.1016/j.molcel.2019.08.014
Abstract: Fibrillar centers (FCs) and dense fibrillar components (DFCs) are essential morphologically distinct sub-regions of mammalian cell nucleoli for rDNA transcription and pre-rRNA processing. Here, we report that a human nucleolus consists of several dozen FC/DFC… read more here.
Keywords: rrna; pre rrna; human nucleolus; fibrillar components ... See more keywords
Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias
Sign Up to like & getrecommendations! Published in 2018 at "Nature Biotechnology"
DOI: 10.1038/nbt.4045
Abstract: Small subunit ribosomal RNA (SSU rRNA) genes, 16S in bacteria and 18S in eukaryotes, have been the standard phylogenetic markers used to characterize microbial diversity and evolution for decades. However, the reference databases of full-length… read more here.
Keywords: primer bias; full length; ssu rrna; rrna ... See more keywords
Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control
Sign Up to like & getrecommendations! Published in 2018 at "Nature Communications"
DOI: 10.1038/s41467-018-03544-x
Abstract: Cleavage of transfer (t)RNA and ribosomal (r)RNA are critical and conserved steps of translational control for cells to overcome varied environmental stresses. However, enzymes that are responsible for this event have not been fully identified… read more here.
Keywords: rrna targeting; rrna; trna rrna; rnase ... See more keywords