Synthesizing Systems Biology Knowledge from Omics Using Genome‐Scale Models
Sign Up to like & getrecommendations! Published in 2020 at "PROTEOMICS"
DOI: 10.1002/pmic.201900282
Abstract: Omic technologies have enabled the complete readout of the molecular state of a cell at different biological scales. In principle, the combination of multiple omic data types can provide an integrated view of the entire… read more here.
Keywords: genome scale; scale models; omic data; biology ... See more keywords
Parallelization and High-Performance Computing Enables Automated Statistical Inference of Multi-scale Models.
Sign Up to like & getrecommendations! Published in 2017 at "Cell systems"
DOI: 10.1016/j.cels.2016.12.002
Abstract: Mechanistic understanding of multi-scale biological processes, such as cell proliferation in a changing biological tissue, is readily facilitated by computational models. While tools exist to construct and simulate multi-scale models, the statistical inference of the… read more here.
Keywords: scale models; statistical inference; multi scale; pabc smc ... See more keywords
Variationally derived discontinuity capturing methods: Fine scale models with embedded weak and strong discontinuities
Sign Up to like & getrecommendations! Published in 2018 at "Computer Methods in Applied Mechanics and Engineering"
DOI: 10.1016/j.cma.2018.05.029
Abstract: Abstract This paper presents a new stabilized method that is endowed with variationally derived Discontinuity Capturing (DC) features to model steep advection fronts and discontinuities that arise in multi-phase flows as well as in mixing… read more here.
Keywords: variationally derived; scale models; fine scale; discontinuity capturing ... See more keywords
Global sensitivity analysis of biological multi-scale models.
Sign Up to like & getrecommendations! Published in 2019 at "Current opinion in biomedical engineering"
DOI: 10.1016/j.cobme.2019.09.012
Abstract: Mathematical models of biological systems need to both reflect and manage the inherent complexities of biological phenomena. Through their versatility and ability to capture behavior at multiple scales, multi-scale models offer a valuable approach. Due… read more here.
Keywords: scale models; analysis; sensitivity analysis; multi scale ... See more keywords
A review on experimental research using scale models for buildings: Application and methodologies
Sign Up to like & getrecommendations! Published in 2017 at "Energy and Buildings"
DOI: 10.1016/j.enbuild.2017.02.060
Abstract: A complete review on scale model testing for buildings, considering a wide range of methodologies and new manufacturing techniques, in areas such as statics and dynamics, acoustics, lighting, aerodynamics and thermodynamics for energy efficiency is… read more here.
Keywords: models buildings; scale models; review experimental; scale model ... See more keywords
A posteriori tests of subgrid-scale models in an isothermal turbulent channel flow
Sign Up to like & getrecommendations! Published in 2019 at "Physics of Fluids"
DOI: 10.1063/1.5091829
Abstract: This paper studies the large-eddy simulation (LES) of isothermal turbulent channel flows. We investigate zero-equation algebraic models without wall function or wall model: functional models, structural models and mixed models. In addition to models from… read more here.
Keywords: turbulent channel; posteriori tests; scale models; subgrid scale ... See more keywords
Parameter inference for enzyme and temperature constrained genome-scale models
Sign Up to like & getrecommendations! Published in 2023 at "Scientific Reports"
DOI: 10.1101/2022.07.05.498798
Abstract: The metabolism of all living organisms is dependent on temperature, and therefore, having a good method to predict temperature effects at a system level is of importance. A recently developed Bayesian computational framework for enzyme… read more here.
Keywords: temperature constrained; scale models; enzyme temperature; temperature ... See more keywords
The need for large-scale distribution data to estimate regional changes in species richness under future climate change
Sign Up to like & getrecommendations! Published in 2017 at "Diversity and Distributions"
DOI: 10.1111/ddi.12634
Abstract: Aim Species distribution models built with geographically restricted data often fail to capture the full range of conditions experienced by species across their entire distribution area. Using such models to predict distribution shifts under future… read more here.
Keywords: scale models; species richness; restricted scale; broad scale ... See more keywords
Specifying Location-Scale Models for Heterogeneous Variances as Multilevel SEMs
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DOI: 10.1177/1094428120913083
Abstract: Standard multilevel models focus on variables that predict the mean while the within-group variability is largely treated as a nuisance. Recent work has shown the advantage of including predictors for both the mean (the location… read more here.
Keywords: specifying location; model; location scale; scale models ... See more keywords
On Operating Groundwater Wells in Grid-Scale Models
Sign Up to like & getrecommendations! Published in 2020 at "Moscow University Geology Bulletin"
DOI: 10.3103/s0145875220010123
Abstract: Abstract The problems of modeling ground-water wells in grid-scale models are considered. An original solution for the calculation of the correction to the model solution for the case of a partially penetrating well (by a… read more here.
Keywords: operating groundwater; wells grid; groundwater wells; grid scale ... See more keywords
Toward an Inclusive and Independent Fruition of Architecture: The Use of Scale Models and Augmented Reality.
Sign Up to like & getrecommendations! Published in 2022 at "Studies in health technology and informatics"
DOI: 10.3233/shti220864
Abstract: While there are many places in Italy that cater to the population with low vision or who is blind, for example the "Museo Tattile Statale Omero" in Ancona, the remarks made by the Unione Italiana… read more here.
Keywords: fruition; system; scale models; augmented reality ... See more keywords