Metabarcoding free‐living marine nematodes using curated 18S and CO1 reference sequence databases for species‐level taxonomic assignments
Sign Up to like & getrecommendations! Published in 2019 at "Ecology and Evolution"
DOI: 10.1002/ece3.4814
Abstract: Abstract High‐throughput sequencing has the potential to describe biological communities with high efficiency yet comprehensive assessment of diversity with species‐level resolution remains one of the most challenging aspects of metabarcoding studies. We investigated the utility… read more here.
Keywords: sequence databases; reference; reference sequence; taxonomic assignments ... See more keywords
Automated detection of records in biological sequence databases that are inconsistent with the literature
Sign Up to like & getrecommendations! Published in 2017 at "Journal of biomedical informatics"
DOI: 10.1016/j.jbi.2017.06.015
Abstract: We investigate and analyse the data quality of nucleotide sequence databases with the objective of automatic detection of data anomalies and suspicious records. Specifically, we demonstrate that the published literature associated with each data record… read more here.
Keywords: quality; literature; detection; inconsistent literature ... See more keywords