SINE_scan: an efficient tool to discover short interspersed nuclear elements (SINEs) in large-scale genomic datasets
Sign Up to like & getrecommendations! Published in 2017 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btw718
Abstract: Motivation: Short Interspersed Nuclear Elements (SINEs) are transposable elements (TEs) that amplify through a copy‐and‐paste mode via RNA intermediates. The computational identification of new SINEs are challenging because of their weak structural signals and rapid… read more here.
Keywords: short interspersed; elements sines; nuclear elements; scan efficient ... See more keywords
Distribution, Diversity, and Long-Term Retention of Grass Short Interspersed Nuclear Elements (SINEs)
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DOI: 10.1093/gbe/evx145
Abstract: Abstract Instances of highly conserved plant short interspersed nuclear element (SINE) families and their enrichment near genes have been well documented, but little is known about the general patterns of such conservation and enrichment and… read more here.
Keywords: short interspersed; grass; interspersed nuclear; retention ... See more keywords